RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 HMGN2P05204 90 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 CHRM4P08173 479 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CSTF2P33240 577 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■■■□□ 18.4
CUX1-205ENST00000425244 GSTM5P46439 218 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TPTEP56180 551 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 SMIM11AP58511 58 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 SNRPGP62308 76 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 SPHARQ15513 63 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TUBA3EQ6PEY2 450 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 LSRQ86X29 649 aaPredicted RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 ZNF687Q8N1G0 1237 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 OR2A1Q8NGT9 310 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CREB3L4Q8TEY5 395 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 ASPNQ9BXN1 380 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 HHATLQ9HCP6 504 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 MRPS30Q9NP92 439 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 EHD3Q9NZN3 535 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 ACSL5Q9ULC5 683 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 RPL36Q9Y3U8 105 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 ATG4BQ9Y4P1 393 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 HAT1O14929 419 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 MYL12BO14950 172 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TBX19O60806 448 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CLEC3AO75596 197 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CYP7B1O75881 506 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 MMP11P24347 488 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 AK4P27144 223 aaPredicted RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 CERS1P27544 350 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 FRKP42685 505 aaPredicted RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 SLC15A1P46059 708 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 KHKP50053 298 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 STARD6P59095 220 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 ZNF45Q02386 682 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 GINS1Q14691 196 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 C18orf63Q68DL7 685 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TSSK4Q6SA08 328 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 FAM92BQ6ZTR7 304 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 ZER1Q7Z7L7 766 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TMEM145Q8NBT3 493 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 OR8J1Q8NGP2 316 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CCL4L1Q8NHW4 92 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 POLR2J2Q9GZM3 115 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 NXF2Q9GZY0 626 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 SLC25A19Q9HC21 320 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 SNTG1Q9NSN8 517 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 USP36Q9P275 1121 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 SIT1Q9Y3P8 196 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 PCDHGB6Q9Y5F9 930 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 A0A1W2PR48 441 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 ISPDA4D126 451 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 TNFRSF10AO00220 468 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 NTN1O95631 604 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 TGM4P49221 684 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 MXD1Q05195 221 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 PRKCDQ05655 676 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 DUSP2Q05923 314 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 TOR1AIP1Q5JTV8 583 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 LIPKQ5VXJ0 399 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 C12orf73Q69YU5 71 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 Q6ZSR6 202 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 ACOT4Q8N9L9 421 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 OR52E1Q8NGJ3 308 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 TMEM203Q969S6 136 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 LRR1Q96L50 414 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 SLC6A18Q96N87 628 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 GPA33Q99795 319 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 ADAM29Q9UKF5 820 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 ENTPD4Q9Y227 616 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 TMA7Q9Y2S6 64 aaKnown RBP10.02□□□□□ -0.81
CUX1-205ENST00000425244 KCNE3Q9Y6H6 103 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 A3GALT2U3KPV4 340 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 CFAP54Q96N23 3096 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 PRSS38A1L453 326 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 LOC110117498-PIK3R3F6TDL0 507 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 RASGRP1O95267 797 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 AIFM1O95831 613 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 SCG5P05408 212 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 IGHV4-34P06331 123 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 PIPP12273 146 aaPredicted RBP10.02□□□□□ -0.81
CUX1-205ENST00000425244 DRD2P14416 443 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 PCYT1AP49585 367 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 AGERQ15109 404 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 SNAPC1Q16533 368 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 OR8H2Q8N162 312 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 FBXL6Q8N531 539 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 OR13H1Q8NG92 308 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 OR1E3Q8WZA6 343 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 CNRIP1Q96F85 164 aaPredicted RBP10.02□□□□□ -0.81
CUX1-205ENST00000425244 TRNT1Q96Q11 434 aaKnown RBP10.02□□□□□ -0.81
CUX1-205ENST00000425244 MND1Q9BWT6 205 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 TAPBPLQ9BX59 468 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 NT5DC2Q9H857 520 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 SPHK1Q9NYA1 384 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 SLC13A4Q9UKG4 626 aa10.02□□□□□ -0.81
CUX1-205ENST00000425244 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.02□□□□□ -0.81
CUX1-205ENST00000425244 A0A1W2PRQ8 180 aa10.01□□□□□ -0.81
CUX1-205ENST00000425244 FAM47E-STBD1D6RA91 191 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms