RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FAM27E3Q08E93 113 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ILKQ13418 452 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 EXOSC7Q15024 291 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 EZH2Q15910 746 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 KNOP1Q1ED39 458 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF528Q3MIS6 628 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 GLYR1Q49A26 553 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 PTPN20Q4JDL3 420 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 LINC01620Q4KN68 170 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 C6orf183Q5T699 404 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF658Q5TYW1 1059 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SUMO4Q6EEV6 95 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 OR4F3Q6IEY1 312 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 PPP1R2P3Q6NXS1 205 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ULK3Q6PHR2 472 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CYB5R4Q7L1T6 521 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CPEB2Q7Z5Q1 589 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SERPINA9Q86WD7 417 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 KMT5CQ86Y97 462 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 GPC2Q8N158 579 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 NAGSQ8N159 534 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 FBXL16Q8N461 479 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ALLCQ8N6M5 410 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM99Q8N816 258 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SNX31Q8N9S9 440 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MLKLQ8NB16 471 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 OR51G2Q8NGK0 314 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 OR14A16Q8NHC5 309 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SAP25Q8TEE9 199 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC107Q8WV48 283 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CAPSLQ8WWF8 208 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ING5Q8WYH8 240 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 DDB2Q92466 427 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MAP4K1Q92918 833 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SCRN2Q96FV2 425 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF514Q96K75 400 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 PELOQ9BRX2 385 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 LRRC1Q9BTT6 524 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 FUCA2Q9BTY2 467 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 UPF3BQ9BZI7 483 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 OR2B2Q9GZK3 357 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 DERL2Q9GZP9 239 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MIS12Q9H081 205 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 OPN3Q9H1Y3 402 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 OR51V1Q9H2C8 321 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ESRP2Q9H6T0 727 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 KAT8Q9H7Z6 458 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SEBOXQ9HB31 216 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 GKN1Q9NS71 199 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CYSLTR2Q9NS75 346 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MS4A12Q9NXJ0 267 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CLEC5AQ9NY25 188 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SENP1Q9P0U3 644 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SLC9A2Q9UBY0 812 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 DCDC2Q9UHG0 476 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 LCMT1Q9UIC8 334 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 RNF6Q9Y252 685 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CSDC2Q9Y534 153 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MROH7-TTC4A0A0A0MT08 1334 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 A0A1W2PNV4 684 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OR6C70A6NIJ9 312 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SHISA7A6NL88 538 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ARHGEF33A8MVX0 844 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 HHLA1C9JL84 531 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 GOLGA8KD6RF30 607 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 E7ESA3 106 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 GOLGA6L19H0YKK7 550 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 TULP2O00295 520 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 NDUFAB1O14561 156 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 TOR1AO14656 332 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 RAB29O14966 203 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SCAMP2O15127 329 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SPINT2O43291 252 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OR10H3O60404 316 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 N4BP1O75113 896 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 LRCH4O75427 683 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CLDN7O95471 211 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CLDN9O95484 217 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 EPOP01588 193 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 DCNP07585 359 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CELA2AP08217 269 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 NPSP0C0P6 89 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 UNGP13051 313 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MSH3P20585 1137 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 GIFP27352 417 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 GTF2E2P29084 291 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PCSK6P29122 969 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CDH5P33151 784 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CYLC1P35663 651 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CBX5P45973 191 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 UQCRFS1P47985 274 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 NPBWR2P48146 333 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CDC34P49427 236 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CASP4P49662 377 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CEBPGP53567 150 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PLA2G16P53816 162 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 RWDD2BP57060 319 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OSTNP61366 133 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ZXDBP98169 803 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OGDHQ02218 1023 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms