RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TMEM233B4DJY2 109 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 UGT2B11O75310 529 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 LYPLA1O75608 230 aaPredicted RBP13.88□□□□□ -0.19
USB1-202ENST00000423271 TRAPPC6AO75865 159 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 SERPINE1P05121 402 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 HPNP05981 417 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 UROSP10746 265 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 DRD2P14416 443 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 SERPINB5P36952 375 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 PTGDSP41222 190 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 CDK9P50750 372 aaKnown RBP13.88□□□□□ -0.19
USB1-202ENST00000423271 SLC18A1P54219 525 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 WNT3P56703 355 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 RPP38P78345 283 aaKnown RBP13.88□□□□□ -0.19
USB1-202ENST00000423271 TLE4Q04727 773 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 CRYZQ08257 329 aaKnown RBP13.88□□□□□ -0.19
USB1-202ENST00000423271 PRSS53Q2L4Q9 553 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 EIPR1Q53HC9 387 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 GALNT18Q6P9A2 607 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 SEM1Q6ZVN7 128 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 PACS2Q86VP3 889 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 GOLGA6L1Q8N7Z2 621 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 CDC26Q8NHZ8 85 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 ZNF675Q8TD23 568 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 HSPBAP1Q96EW2 488 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 TMEM41AQ96HV5 264 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 METTL7AQ9H8H3 244 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 ZNF395Q9H8N7 513 aaPredicted RBP13.88□□□□□ -0.19
USB1-202ENST00000423271 EML4Q9HC35 981 aaKnown RBP13.88□□□□□ -0.19
USB1-202ENST00000423271 GALNT9Q9HCQ5 603 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 NKIRAS1Q9NYS0 192 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 SLC6A5Q9Y345 797 aa13.88□□□□□ -0.19
USB1-202ENST00000423271 KIAA1549Q9HCM3 1950 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 ANKRD17O75179 2603 aaKnown RBP13.87□□□□□ -0.19
USB1-202ENST00000423271 SERTM1A2A2V5 107 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 C2orf72A6NCS6 295 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 FRG2CA6NGY1 282 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 ACOX3O15254 700 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 ITM2AO43736 263 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 ANXA4P09525 319 aaPredicted RBP13.87□□□□□ -0.19
USB1-202ENST00000423271 NEFHP12036 1026 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 GABRA1P14867 456 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 NAGAP17050 411 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 PTPN6P29350 595 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 PPICP45877 212 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 ZFP36L2P47974 494 aaKnown RBP13.87□□□□□ -0.19
USB1-202ENST00000423271 SPDYAQ5MJ70 313 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 SH2D4BQ5SQS7 431 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 DCST1Q5T197 706 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 KANK2Q63ZY3 851 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 TIGD3Q6B0B8 471 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 ANGPTL8Q6UXH0 198 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 NPSR1Q6W5P4 371 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 AGR3Q8TD06 166 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 OSBPL11Q9BXB4 747 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 SLC35C2Q9NQQ7 365 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 PRODH2Q9UF12 536 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 GPR55Q9Y2T6 319 aaPredicted RBP13.87□□□□□ -0.19
USB1-202ENST00000423271 POLR3HQ9Y535 204 aaPredicted RBP13.87□□□□□ -0.19
USB1-202ENST00000423271 PTGDR2Q9Y5Y4 395 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 SPG11Q96JI7 2443 aa13.87□□□□□ -0.19
USB1-202ENST00000423271 PRAMEF25A6NGN4 478 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 HMGB1P1B2RPK0 211 aaPredicted RBP13.86□□□□□ -0.19
USB1-202ENST00000423271 TMEM114B3SHH9 223 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 SNPHO15079 494 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 TO15178 435 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 HSPA4LO95757 839 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 FGF4P08620 206 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 DRD5P21918 477 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 GRK2P25098 689 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 CORO7P57737 925 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 ABCE1P61221 599 aaKnown RBP13.86□□□□□ -0.19
USB1-202ENST00000423271 DCAF7P61962 342 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 ZNF763Q0D2J5 394 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 HEPACAMQ14CZ8 416 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 TOMM20Q15388 145 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 CEBPEQ15744 281 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 IMPG1Q17R60 797 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 ACSF3Q4G176 576 aaPredicted RBP13.86□□□□□ -0.19
USB1-202ENST00000423271 WIPI1Q5MNZ9 446 aaPredicted RBP13.86□□□□□ -0.19
USB1-202ENST00000423271 RIPPLY2Q5TAB7 128 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 TMEM81Q6P7N7 255 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 NUP54Q7Z3B4 507 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 DMRTC2Q8IXT2 367 aaPredicted RBP13.86□□□□□ -0.19
USB1-202ENST00000423271 NAXEQ8NCW5 288 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 OR7G2Q8NG99 324 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 TMBIM1Q969X1 311 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 VSTM2LQ96N03 204 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 BTBD9Q96Q07 612 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 TIMP4Q99727 224 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 TUBB1Q9H4B7 451 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 FOLH1BQ9HBA9 442 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 GIMAP4Q9NUV9 329 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 SIRT5Q9NXA8 310 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 KLRF1Q9NZS2 232 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 ZDHHC2Q9UIJ5 367 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 MAPRE3Q9UPY8 281 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 TRAF6Q9Y4K3 522 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 PCDHGB3Q9Y5G1 929 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 DNAJC15Q9Y5T4 150 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms