RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ABTB1Q969K4 478 aaPredicted RBP7.91□□□□□ -1.14
MDC1-204ENST00000422266 PPP3R2Q96LZ3 170 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 VSTM2LQ96N03 204 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 ZFP3Q96NJ6 502 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 GNRHR2Q96P88 292 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 KCNA7Q96RP8 456 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 PRPF18Q99633 342 aaKnown RBP7.91□□□□□ -1.14
MDC1-204ENST00000422266 TREX2Q9BQ50 279 aaPredicted RBP7.91□□□□□ -1.14
MDC1-204ENST00000422266 EBPLQ9BY08 206 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 PRDM14Q9GZV8 571 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 UBQLN3Q9H347 655 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 PTGES2Q9H7Z7 377 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 CALHM2Q9HA72 323 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 LRTM1Q9HBL6 345 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 Q9N2J8 555 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 KCNN3Q9UGI6 736 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 ABCG2Q9UNQ0 655 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 C19orf53Q9UNZ5 99 aaPredicted RBP7.91□□□□□ -1.14
MDC1-204ENST00000422266 LIPGQ9Y5X9 500 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 PHF3Q92576 2039 aaKnown RBP7.91□□□□□ -1.14
MDC1-204ENST00000422266 PKDREJQ9NTG1 2253 aa7.91□□□□□ -1.14
MDC1-204ENST00000422266 CACNA1CQ13936 2221 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 NINQ8N4C6 2090 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 A0A1W2PS29 197 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 CD8B2A6NJW9 211 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 PDPK1O15530 556 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 TBX19O60806 448 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 UGT2B11O75310 529 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 LYPLA1O75608 230 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 KCNH1O95259 989 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 HSPA4LO95757 839 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 JUNP05412 331 aaKnown RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 CELA3AP09093 270 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 MYZAPP0CAP1 466 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 CT45A8P0DMV1 189 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 CT45A9P0DMV2 189 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 GLI4P10075 376 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 PTPN6P29350 595 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 LCN1P31025 176 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 SRD5A2P31213 254 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 GPC1P35052 558 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 FOXA1P55317 472 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 EEFSECP57772 596 aaKnown RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 CRYZQ08257 329 aaKnown RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 ZNF155Q12901 538 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 MAD2L1Q13257 205 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 PCLAFQ15004 111 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 LTB4RQ15722 352 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 NNATQ16517 81 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 CT45A2Q5DJT8 189 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 NSUN5P2Q63ZY6 315 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 ZCCHC12Q6PEW1 402 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 ANGPTL8Q6UXH0 198 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 TMEM64Q6YI46 380 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 LARP4Q71RC2 724 aaKnown RBP eCLIP7.9□□□□□ -1.14
MDC1-204ENST00000422266 IFNEQ86WN2 208 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 PLCZ1Q86YW0 608 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 SLC44A2Q8IWA5 706 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 PRR22Q8IZ63 422 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 MMP21Q8N119 569 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 OR2L13Q8N349 312 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 MARVELD2Q8N4S9 558 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 ACBD4Q8NC06 268 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 OR14L1PQ8NHC6 308 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 GOT1L1Q8NHS2 421 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 ZPLD1Q8TCW7 415 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 AENQ8WTP8 325 aaKnown RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 KAT2AQ92830 837 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 HGDQ93099 445 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 TMBIM1Q969X1 311 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 PPCDCQ96CD2 204 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 NTNG2Q96CW9 530 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 ZIM3Q96PE6 472 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 FAM111AQ96PZ2 611 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 ADOQ96SZ5 270 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 TIMP4Q99727 224 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 TMEM109Q9BVC6 243 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 GATA5Q9BWX5 397 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 TRIM8Q9BZR9 551 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 SLC6A15Q9H2J7 730 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 REEP4Q9H6H4 257 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 FOLH1BQ9HBA9 442 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 MCCC2Q9HCC0 563 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 ACSS1Q9NUB1 689 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 ATAD3AQ9NVI7 634 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 SPRR3Q9UBC9 169 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 DTX4Q9Y2E6 619 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 TRAF6Q9Y4K3 522 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 POLR3HQ9Y535 204 aaPredicted RBP7.9□□□□□ -1.14
MDC1-204ENST00000422266 FAM215AQ9Y5M1 114 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 HRH3Q9Y5N1 445 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 WIF1Q9Y5W5 379 aa7.9□□□□□ -1.14
MDC1-204ENST00000422266 FAM90A27PA6NNH2 459 aa7.89□□□□□ -1.15
MDC1-204ENST00000422266 GNB5O14775 395 aa7.89□□□□□ -1.15
MDC1-204ENST00000422266 ZNHIT1O43257 154 aa7.89□□□□□ -1.15
MDC1-204ENST00000422266 TSPAN2O60636 221 aa7.89□□□□□ -1.15
MDC1-204ENST00000422266 TOXO94900 526 aa7.89□□□□□ -1.15
MDC1-204ENST00000422266 GOSR1O95249 250 aa7.89□□□□□ -1.15
MDC1-204ENST00000422266 IL18BPO95998 194 aa7.89□□□□□ -1.15
MDC1-204ENST00000422266 SNRPB2P08579 225 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms