RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 FBXO46Q6PJ61 603 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 FAM131AQ6UXB0 335 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 AMIGO1Q86WK6 493 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 ABCA7Q8IZY2 2146 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 OR51G2Q8NGK0 314 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 TEX47Q8TBZ9 253 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 COX14Q96I36 57 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 OPALINQ96PE5 141 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 C19orf43Q9BQ61 176 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 NDRG2Q9UN36 371 aaKnown RBP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 PCDHGB1Q9Y5G3 927 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 CD8B2A6NJW9 211 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 REM1O75628 298 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 CD8BP10966 210 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 PEBP1P30086 187 aaKnown RBP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 CSTF2P33240 577 aaKnown RBP eCLIP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 SDC2P34741 201 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 EIF2DP41214 584 aaKnown RBP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 GXYLT1Q4G148 440 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 SDE2Q6IQ49 451 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 ABHD17CQ6PCB6 329 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 UBASH3BQ8TF42 649 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 TMEM80Q96HE8 168 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 SLC6A18Q96N87 628 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 YIPF2Q9BWQ6 316 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 MROQ9BYG7 248 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 HHATLQ9HCP6 504 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 THSD1Q9NS62 852 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 REV1Q9UBZ9 1251 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 MAPRE3Q9UPY8 281 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 CELA2BP08218 269 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-213ENST00000421756 TNFSF8P32971 234 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 PCBP4P57723 403 aaKnown RBP12.53□□□□□ -0.4
MCF2L-213ENST00000421756 FUT5Q11128 374 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 C1DQ13901 141 aaKnown RBP12.53□□□□□ -0.4
MCF2L-213ENST00000421756 ATAD3BQ5T9A4 648 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 RSBN1Q5VWQ0 802 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-213ENST00000421756 GLCCI1Q86VQ1 547 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 TBC1D19Q8N5T2 526 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 CREB3L4Q8TEY5 395 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 HERVK_113Q902F9 699 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 RNFT2Q96EX2 444 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 DIRAS2Q96HU8 199 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 MCHR1Q99705 422 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 SAP130Q9H0E3 1048 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 ATP13A2Q9NQ11 1180 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 USP36Q9P275 1121 aaKnown RBP12.53□□□□□ -0.4
MCF2L-213ENST00000421756 PCDHGB6Q9Y5F9 930 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 DOCK8Q8NF50 2099 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 MAN2B1O00754 1011 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 TMCC2O75069 709 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 UPK1BO75841 260 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 PDE9AO76083 593 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 EPPINO95925 133 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 ALPPP05187 535 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 GABRB1P18505 474 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 MPIP34949 423 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 SLC9A3P48764 834 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 C1orf53Q5VUE5 145 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 ANKRD54Q6NXT1 300 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 OR7G2Q8NG99 324 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 NECTIN4Q96NY8 510 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 DPH1Q9BZG8 443 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 PCYT1AP49585 367 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 RPS25P62851 125 aaKnown RBP12.53□□□□□ -0.4
MCF2L-213ENST00000421756 ITPRIPL2Q3MIP1 535 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 ADAMTSL4Q6UY14 1074 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 SUN3Q8TAQ9 357 aa12.53□□□□□ -0.4
MCF2L-213ENST00000421756 FAM186AA6NE01 2351 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 SERTM1A2A2V5 107 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 PEX12O00623 359 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 P2RX6O15547 441 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 KCNK2O95069 426 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 EGFP01133 1207 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 CMPK1P30085 196 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 AGERQ15109 404 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 NRARPQ7Z6K4 114 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 GATSQ8NAP1 163 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 OR8D4Q8NGM9 314 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 OR52P1PQ8NH57 321 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 LINC00615Q96LM1 132 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-213ENST00000421756 MENTQ9BUN1 341 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 BTBD1Q9H0C5 482 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 MMP27Q9H306 513 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 SLC28A3Q9HAS3 691 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 SIAEQ9HAT2 523 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 SSR3Q9UNL2 185 aa12.52□□□□□ -0.4
MCF2L-213ENST00000421756 TRIM64BA6NI03 449 aa12.52□□□□□ -0.41
MCF2L-213ENST00000421756 CTSVO60911 334 aa12.52□□□□□ -0.41
MCF2L-213ENST00000421756 SOX30O94993 753 aa12.52□□□□□ -0.41
MCF2L-213ENST00000421756 SAGP10523 405 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-213ENST00000421756 TGM1P22735 817 aa12.52□□□□□ -0.41
MCF2L-213ENST00000421756 RPS21P63220 83 aaKnown RBP12.52□□□□□ -0.41
MCF2L-213ENST00000421756 ZNF33BQ06732 778 aa12.52□□□□□ -0.41
MCF2L-213ENST00000421756 SYT14P1Q58G82 188 aa12.52□□□□□ -0.41
MCF2L-213ENST00000421756 ZNF776Q68DI1 518 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-213ENST00000421756 IKBIPQ70UQ0 350 aa12.52□□□□□ -0.41
MCF2L-213ENST00000421756 KIF18BQ86Y91 864 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms