RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 ELAVL4P26378 380 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 GPC1P35052 558 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 SERPINB5P36952 375 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 NUP107P57740 925 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 RFTN2Q52LD8 501 aaPredicted RBP16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 CEP85LQ5SZL2 805 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 TIGD3Q6B0B8 471 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 ANKRD26P1Q6NSI1 321 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 LARP4Q71RC2 724 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 PPCDCQ96CD2 204 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 TMEM41AQ96HV5 264 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 VSTM2LQ96N03 204 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 AMDHD1Q96NU7 426 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 SH3BP4Q9P0V3 963 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 BAIAP2L1Q9UHR4 511 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 RAB21Q9UL25 225 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 MAPRE3Q9UPY8 281 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 EXO1Q9UQ84 846 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 RNF6Q9Y252 685 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 TMED5Q9Y3A6 229 aa16.09■□□□□ 0.17
TNFAIP3-203ENST00000421450 PHF3Q92576 2039 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 A0A087WV62 115 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 WDR91A4D1P6 747 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 OR6C70A6NIJ9 312 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 FAM90A27PA6NNH2 459 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 NPIPB8E9PQR5 432 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 LSM1O15116 133 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 TYROBPO43914 113 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 ABCB7O75027 752 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 PEX11AO75192 247 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 SKAP2O75563 359 aaPredicted RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 CT45A8P0DMV1 189 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 CT45A9P0DMV2 189 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 GABRA1P14867 456 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 SDC1P18827 310 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 ENDOUP21128 410 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 MAPK1P28482 360 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 CHRNB4P30926 498 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 GCKP35557 465 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 CDK9P50750 372 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 PSPHP78330 225 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 MRPS22P82650 360 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 HSPB3Q12988 150 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 EFR3AQ14156 821 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 ZNHIT3Q15649 155 aaPredicted RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 CT45A2Q5DJT8 189 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 C1orf185Q5T7R7 199 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 RNF165Q6ZSG1 346 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 SZRD1Q7Z422 152 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 CCDC71Q8IV32 467 aaPredicted RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 ZFP28Q8NHY6 868 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 EFHD2Q96C19 240 aaPredicted RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 PKNOX2Q96KN3 472 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 PPP3R2Q96LZ3 170 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 REEP4Q9H6H4 257 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 GALNT9Q9HCQ5 603 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 KCNK9Q9NPC2 374 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 C19orf53Q9UNZ5 99 aaPredicted RBP16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 SLC6A5Q9Y345 797 aa16.08■□□□□ 0.16
TNFAIP3-203ENST00000421450 TMEM114B3SHH9 223 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 HSPA4LO95757 839 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 HOXD4P09016 255 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 MYZAPP0CAP1 466 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 ASMTP46597 345 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 SNTA1Q13424 505 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 ATP6AP1LQ52LC2 224 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 WIPI1Q5MNZ9 446 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 FNDC7Q5VTL7 733 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 TMEM81Q6P7N7 255 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 NPSR1Q6W5P4 371 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 ZNF551Q7Z340 670 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 MCEMP1Q8IX19 187 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 CIDECQ96AQ7 238 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 ELP4Q96EB1 424 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 TTYH2Q9BSA4 534 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 GIMAP2Q9UG22 337 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 ZDHHC2Q9UIJ5 367 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 CENPEQ02224 2701 aa16.07■□□□□ 0.16
TNFAIP3-203ENST00000421450 C19orf84I3L1E1 186 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 UPK1AO00322 258 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 PLOD2O00469 737 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 SNPHO15079 494 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 TSPAN2O60636 221 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 HPNP05981 417 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 BCKDHAP12694 445 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 DDX5P17844 614 aaKnown RBP16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 PTPN6P29350 595 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 RFX3P48380 749 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 SERPINB4P48594 390 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 PNLIPRP2P54317 469 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 PRKAG1P54619 331 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 MANFP55145 182 aaKnown RBP16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 UGT3A2Q3SY77 523 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 EIPR1Q53HC9 387 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 R3HCC1LQ7Z5L2 792 aaKnown RBP16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 WDR53Q7Z5U6 358 aaPredicted RBP16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 CROCCP2Q86T23 111 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 YRDCQ86U90 279 aaKnown RBP16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 EXOC3L1Q86VI1 746 aa16.06■□□□□ 0.16
TNFAIP3-203ENST00000421450 OR4N2Q8NGD1 307 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms