RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 OR5AK3PQ8NH89 298 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 PSMA8Q8TAA3 256 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 SFXN5Q8TD22 340 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 PAQR8Q8TEZ7 354 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 TMBIM1Q969X1 311 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 OTUB1Q96FW1 271 aaPredicted RBP11.48□□□□□ -0.57
SKA1-203ENST00000417656 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 C3orf14Q9HBI5 128 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 SACM1LQ9NTJ5 587 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
SKA1-203ENST00000417656 OLAHQ9NV23 265 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 FAM120CQ9NX05 1096 aaKnown RBP11.48□□□□□ -0.57
SKA1-203ENST00000417656 ZIM2Q9NZV7 527 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 NTMQ9P121 344 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 CNOT11Q9UKZ1 510 aaKnown RBP11.48□□□□□ -0.57
SKA1-203ENST00000417656 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
SKA1-203ENST00000417656 CHCHD2Q9Y6H1 151 aaPredicted RBP11.48□□□□□ -0.57
SKA1-203ENST00000417656 RNF103-CHMP3A0A140T963 221 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 CAPN14A8MX76 684 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 SCN2BO60939 215 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 SLC22A3O75751 556 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 CPSF4O95639 269 aaKnown RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 PGRP06401 933 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 TROVE2P10155 538 aaKnown RBP eCLIP11.47□□□□□ -0.57
SKA1-203ENST00000417656 MST1P26927 711 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 PIGAP37287 484 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 ZFP36L2P47974 494 aaKnown RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 CCT3P49368 545 aaKnown RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 GAB1Q13480 694 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 LASP1Q14847 261 aaKnown RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 ZNHIT3Q15649 155 aaPredicted RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 TIGD2Q4W5G0 525 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 ANXA8L1Q5VT79 327 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 BICRALQ6AI39 1079 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 DNAJC14Q6Y2X3 702 aaPredicted RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 CLEC4FQ8N1N0 589 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 GLB1L3Q8NCI6 653 aaPredicted RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 OR2M7Q8NG81 312 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 OR56A1Q8NGH5 318 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 SPPL2AQ8TCT8 520 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 FAR1Q8WVX9 515 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 STON2Q8WXE9 905 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 NR4A3Q92570 626 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 SLC9A6Q92581 669 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 JADE3Q92613 823 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 HGDQ93099 445 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 EFHD2Q96C19 240 aaPredicted RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 C16orf58Q96GQ5 468 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 BARD1Q99728 777 aaKnown RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 SLX1AQ9BQ83 275 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 SIKE1Q9BRV8 207 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 YIPF4Q9BSR8 244 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 TMEM120AQ9BXJ8 343 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 TSPAN10Q9H1Z9 355 aaPredicted RBP11.47□□□□□ -0.57
SKA1-203ENST00000417656 Q9N2J8 555 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 AGPAT4Q9NRZ5 378 aa11.47□□□□□ -0.57
SKA1-203ENST00000417656 PRSS51A0A1B0GVH4 220 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 GXYLT2A0PJZ3 443 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 KLRC4-KLRK1H3BQV0 150 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 J3QKU1 62 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 TP53I11O14683 189 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 TSPAN2O60636 221 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 UGT2B11O75310 529 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 REM1O75628 298 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 CRYABP02511 175 aaKnown RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 HMGN2P05204 90 aaKnown RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 ZNF24P17028 368 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 NAGAP17050 411 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 IL12BP29460 328 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 GABRA3P34903 492 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 KRT20P35900 424 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 UQCRFS1P47985 274 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 RFX3P48380 749 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 MRPL19P49406 292 aaKnown RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 PRIM2P49643 509 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 TDGF1P3P51864 188 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 RPS26P62854 115 aaKnown RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 PSPHP78330 225 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 ALDH6A1Q02252 535 aaKnown RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 DUSP5Q16690 384 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 RNFT1Q5M7Z0 435 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 SLC22A10Q63ZE4 541 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 ZNF324BQ6AW86 544 aaPredicted RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 GK5Q6ZS86 529 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 CDRT4Q8N9R6 151 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 ZFP62Q8NB50 900 aaPredicted RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 SLC16A11Q8NCK7 471 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 GPR151Q8TDV0 419 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 PIK3R3Q92569 461 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 DIO2Q92813 273 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 HOXB13Q92826 284 aaPredicted RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 MOAP1Q96BY2 351 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 CHMP6Q96FZ7 201 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 RMND5BQ96G75 393 aaPredicted RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 SLC35A4Q96G79 324 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 RILPQ96NA2 401 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 CCDC115Q96NT0 180 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 COL21A1Q96P44 957 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 OR52E6Q96RD3 313 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 NODALQ96S42 347 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms