RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ADAMTSL4Q6UY14 1074 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 NKAIN4Q8IVV8 208 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 FBXL6Q8N531 539 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 NATD1Q8N6N6 113 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 OR9A2Q8NGT5 310 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 SETD6Q8TBK2 473 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 TMEM163Q8TC26 289 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 DOK4Q8TEW6 326 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 SUSD6Q92537 303 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 WDFY2Q96P53 400 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 TMED9Q9BVK6 235 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 INSL6Q9Y581 213 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 ATG2BQ96BY7 2078 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 SLC2A10O95528 541 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 AIFM1O95831 613 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 RPN2P04844 631 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 ACP2P11117 423 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 GNSP15586 552 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 DRD3P35462 400 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 GPR4P46093 362 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 SOX9P48436 509 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 MRPS15P82914 257 aaKnown RBP13.6□□□□□ -0.23
HDAC9-208ENST00000417496 PLK5Q496M5 336 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 KIAA1161Q6NSJ0 714 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF730Q6ZMV8 503 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 TMEM145Q8NBT3 493 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 BBS1Q8NFJ9 593 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 TEX47Q8TBZ9 253 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 OTULINQ96BN8 352 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 MS4A6EQ96DS6 147 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 RANGRFQ9HD47 186 aaPredicted RBP13.6□□□□□ -0.23
HDAC9-208ENST00000417496 ASB4Q9Y574 426 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
HDAC9-208ENST00000417496 SCN3AQ9NY46 2000 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 MYO15AQ9UKN7 3530 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 A0A0B4J293 547 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 SHISA3A0PJX4 238 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 MID1O15344 667 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 PLA2G10O15496 165 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 PRODHO43272 600 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 DDX5P17844 614 aaKnown RBP13.59□□□□□ -0.23
HDAC9-208ENST00000417496 HIST1H1TP22492 207 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-208ENST00000417496 SLC9A3P48764 834 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 KHKP50053 298 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 CLDN2P57739 230 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 KRT33BQ14525 404 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.59□□□□□ -0.23
HDAC9-208ENST00000417496 KLHL22Q53GT1 634 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 RNLSQ5VYX0 342 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 UBASH3BQ8TF42 649 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 RNF31Q96EP0 1072 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 MSLNLQ96KJ4 702 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 CAMK1GQ96NX5 476 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 PRDM7Q9NQW5 492 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 SPHK1Q9NYA1 384 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 NDRG2Q9UN36 371 aaKnown RBP13.59□□□□□ -0.23
HDAC9-208ENST00000417496 FAM183AA6NL82 134 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 CLEC3AO75596 197 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 ZIC2O95409 532 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-208ENST00000417496 ACADMP11310 421 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 DRD2P14416 443 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 MLC1Q15049 377 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 P2RY14Q15391 338 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF791Q3KP31 576 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-208ENST00000417496 C3orf38Q5JPI3 329 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 DDI2Q5TDH0 399 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 CLDN22Q8N7P3 220 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 IL17RCQ8NAC3 791 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 BBS10Q8TAM1 723 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 ARSGQ96EG1 525 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 OR7D2Q96RA2 312 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 MCOLN1Q9GZU1 580 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 PCBD2Q9H0N5 130 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 SLC38A1Q9H2H9 487 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 BCL2L10Q9HD36 194 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 SLC6A20Q9NP91 592 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 NOX1Q9Y5S8 564 aa13.59□□□□□ -0.23
HDAC9-208ENST00000417496 C2orf92A0A1B0GVN3 265 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 SLC30A4O14863 429 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 CASKO14936 926 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 HPGDSO60760 199 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 UBXN7O94888 489 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 CELP19835 753 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 TRIM23P36406 574 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 KIR2DL3P43628 341 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 RAB40BQ12829 278 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 FGL2Q14314 439 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 SLC25A30Q5SVS4 291 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 C1orf53Q5VUE5 145 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 PAMR1Q6UXH9 720 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 SLC36A4Q6YBV0 504 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 RRM2BQ7LG56 351 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 SHISA5Q8N114 240 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 OR4Q3Q8NH05 313 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 FAIM2Q9BWQ8 316 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 PRRG3Q9BZD7 231 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 MRPS30Q9NP92 439 aaKnown RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms