RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CCZ1BP86790 482 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 CCZ1P86791 482 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 KRT31Q15323 416 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 TRADDQ15628 312 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 Q1RN00 199 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 SHROOM1Q2M3G4 852 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 HIST2H2AA3Q6FI13 130 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 STEAP1BQ6NZ63 245 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 ABRAXAS1Q6UWZ7 409 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 MOB2Q70IA6 237 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 SERINC5Q86VE9 423 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 SPAG16Q8N0X2 631 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 CHCHD4Q8N4Q1 142 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 MSANTD4Q8NCY6 345 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 OR6T1Q8NGN1 323 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 TYMSOSQ8TAI1 123 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 COG3Q96JB2 828 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 NAP1L3Q99457 506 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 ABCC13Q9NSE7 274 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 EIF3KQ9UBQ5 218 aaKnown RBP2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 SLC6A5Q9Y345 797 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 LAMB2P55268 1798 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 ATP10DQ9P241 1426 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 COL5A3P25940 1745 aaPredicted RBP2.9□□□□□ -1.94
HMGB1P11-201ENST00000413899 DDX60Q8IY21 1712 aaKnown RBP2.9□□□□□ -1.94
HMGB1P11-201ENST00000413899 BCORQ6W2J9 1755 aa2.9□□□□□ -1.94
HMGB1P11-201ENST00000413899 TRBV2A0A0J9YWF9 115 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF487B1APH4 448 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 DDX39AO00148 427 aaKnown RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 TLR4O00206 839 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 EEF2KO00418 725 aaKnown RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 SH2D1BO14796 132 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 VEGFDO43915 354 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 REC8O95072 547 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ABHD2P08910 425 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 HIST1H2AGP0C0S8 130 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 CALML3P27482 149 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 OAS2P29728 719 aaKnown RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 MAT2AP31153 395 aaKnown RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 COPB2P35606 906 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 TNNT2P45379 298 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 CSRP3P50461 194 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 CNN1P51911 297 aaKnown RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 TRA2BP62995 288 aaKnown RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 WDR43Q15061 677 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 GPAT3Q53EU6 434 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 PRAMEF7Q5VXH5 474 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 DLEU7Q6UYE1 221 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 TOM1L2Q6ZVM7 507 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 RAPH1Q70E73 1250 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ASRGL1Q7L266 308 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ADCK1Q86TW2 530 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 PEX5LQ8IYB4 626 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 LINC00518Q8N0U6 118 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ARL14Q8N4G2 192 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF713Q8N859 430 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 COLGALT1Q8NBJ5 622 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 KIAA1524Q8TCG1 905 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 HIST1H2ACQ93077 130 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 DTD2Q96FN9 168 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 RBM18Q96H35 190 aaKnown RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 APOL2Q9BQE5 337 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 DCTPP1Q9H773 170 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 IL1RL2Q9HB29 575 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ELL3Q9HB65 397 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 SENP1Q9P0U3 644 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ERVK-18Q9QC07 812 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF107Q9UII5 783 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 RNF24Q9Y225 148 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 NWD2Q9ULI1 1742 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 AFF2P51816 1311 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 MAP3K19Q56UN5 1328 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 TTC21AQ8NDW8 1320 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 PCNX3Q9H6A9 2034 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 PXDNLA1KZ92 1463 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 LRP6O75581 1613 aa2.9□□□□□ -1.95
HMGB1P11-201ENST00000413899 COL14A1Q05707 1796 aaKnown RBP2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 MYH15Q9Y2K3 1946 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 FLT4P35916 1363 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 KIF24Q5T7B8 1368 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 MEGF6O75095 1541 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 IGHV3OR16-12A0A075B7B8 117 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 OVOS2A0A0G2JMS6 1433 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 A0A1W2PQ72 361 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 PHOX2AO14813 284 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 SRPX2O60687 465 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 ATP6V1G1O75348 118 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 BAG2O95816 211 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 PIGRP01833 764 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 SNRPCP09234 159 aaKnown RBP2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 HMOX1P09601 288 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF853P0CG23 659 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 ACADSBP45954 432 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 BRCC3P46736 316 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 NOVP48745 357 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF131P52739 623 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 CASP9P55211 416 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 KRTAP10-3P60369 221 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 PPIAP62937 165 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms