RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DGLUCYQ7Z3D6 616 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 SERPINA11Q86U17 422 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 SLC39A1Q9NY26 324 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 CCL26Q9Y258 94 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 TOGARAM1Q9Y4F4 1720 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 A6NIZ1 184 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 RAD51DO75771 328 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 CAPN3P20807 821 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 NAA10P41227 235 aaPredicted RBP16.35■□□□□ 0.21
PHRF1-202ENST00000413872 HTR3AP46098 478 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 RAP1BP61224 184 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 RAP1AP62834 184 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 SELENOWP63302 87 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 ZNF423Q2M1K9 1284 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 PGBD2Q6P3X8 592 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 SHFQ7M4L6 423 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 NAGSQ8N159 534 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 LRR1Q96L50 414 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 POU2F3Q9UKI9 436 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 CLEC4EQ9ULY5 219 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 MYH10P35580 1976 aa16.35■□□□□ 0.21
PHRF1-202ENST00000413872 A0A0U1RQS6 177 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 HRGP04196 525 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 MMP12P39900 470 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 MAGEA8P43361 318 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 CTSL3PQ5NE16 218 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 C2orf42Q9NWW7 574 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 KLKB1P03952 638 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 PDHA2P29803 388 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 GPR4P46093 362 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 ENPP6Q6UWR7 440 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 BAIAP2L2Q6UXY1 529 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 TMEFF1Q8IYR6 380 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 FEVQ99581 238 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 ACPTQ9BZG2 426 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 LRRN3E7EW58 273 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 FRKP42685 505 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-202ENST00000413872 SOX2P48431 317 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 CBFBQ13951 182 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 GGTA1PQ4G0N0 100 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 EIF5AL1Q6IS14 154 aaKnown RBP16.34■□□□□ 0.21
PHRF1-202ENST00000413872 LIX1LQ8IVB5 337 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 MFSD9Q8NBP5 474 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 INO80EQ8NBZ0 244 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-202ENST00000413872 NEIL3Q8TAT5 605 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 HOXB13Q92826 284 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-202ENST00000413872 SLC22A12Q96S37 553 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 LRRN3Q9H3W5 708 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 METTL8Q9H825 291 aaKnown RBP16.34■□□□□ 0.21
PHRF1-202ENST00000413872 TBX21Q9UL17 535 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 HS3ST3A1Q9Y663 406 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 CACNA1SQ13698 1873 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-202ENST00000413872 ICAM2P13598 275 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 PYCR1P32322 319 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 GABARAPL2P60520 117 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 GALK2Q01415 458 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 SHHQ15465 462 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 OPN5Q6U736 354 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 NRMQ8IXM6 262 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 DOK4Q8TEW6 326 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 INSM2Q96T92 566 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-202ENST00000413872 MMP27Q9H306 513 aa16.34■□□□□ 0.21
PHRF1-202ENST00000413872 TEX13DA0A0J9YY54 714 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 NME4O00746 187 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 ZFAND5O76080 213 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 GPR75O95800 540 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 OSMP13725 252 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 FUT4P22083 530 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 CTHP32929 405 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 CTXN1P60606 82 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 RPL19P84098 196 aaKnown RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 KCTD11Q693B1 232 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 LRFN4Q6PJG9 635 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 TSPYL5Q86VY4 417 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 SNX29P2Q8IUI4 249 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 ZNF595Q8IYB9 648 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 PITX2Q99697 317 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 TMEM121BQ9BXQ6 578 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 MOV10Q9HCE1 1003 aaKnown RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 ACSS1Q9NUB1 689 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 C5AR2Q9P296 337 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 TMBIM6P55061 237 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 CARTPTQ16568 116 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 PRR11Q96HE9 360 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 BARD1Q99728 777 aaKnown RBP16.33■□□□□ 0.21
PHRF1-202ENST00000413872 RIMS3Q9UJD0 308 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 ADAMTS6Q9UKP5 1117 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 TJP1Q07157 1748 aa16.33■□□□□ 0.21
PHRF1-202ENST00000413872 CENPBD1B2RD01 187 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 ATE1O95260 518 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 CRABP1P29762 137 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 ENTPD1P49961 510 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 TLE3Q04726 772 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 CDKN3Q16667 212 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 ALG10Q5BKT4 473 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 PYHIN1Q6K0P9 492 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 OR52E2Q8NGJ4 325 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms