RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 RPL6Q02878 288 aaKnown RBP8.41□□□□□ -1.06
SIK3-202ENST00000413553 PTSQ03393 145 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 SLBPQ14493 270 aaKnown RBP eCLIP8.41□□□□□ -1.06
SIK3-202ENST00000413553 PRSS53Q2L4Q9 553 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 RAET1GQ6H3X3 334 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 TMEM107Q6UX40 140 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 ZNF783Q6ZMS7 281 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 TRILQ7L0X0 811 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 CHMP1BQ7LBR1 199 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 ADGRF3Q8IZF5 1079 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 LMNTD1Q8N9Z9 388 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 OR4K5Q8NGD3 323 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 SMG7Q92540 1137 aaKnown RBP8.41□□□□□ -1.06
SIK3-202ENST00000413553 ARHGAP9Q9BRR9 750 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 FNDC11Q9BVV2 318 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 SLC6A16Q9GZN6 736 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 RNF32Q9H0A6 362 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 EMC7Q9NPA0 242 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 LSM7Q9UK45 103 aaKnown RBP8.41□□□□□ -1.06
SIK3-202ENST00000413553 RABL2BQ9UNT1 228 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 ZFR2Q9UPR6 939 aaKnown RBP8.41□□□□□ -1.06
SIK3-202ENST00000413553 EXOSC1Q9Y3B2 195 aaKnown RBP8.41□□□□□ -1.06
SIK3-202ENST00000413553 ASB4Q9Y574 426 aa8.41□□□□□ -1.06
SIK3-202ENST00000413553 CCDC85CA6NKD9 419 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 ANHXE9PGG2 379 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 RFXAPO00287 272 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 GRM6O15303 877 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 SGTAO43765 313 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 TOXO94900 526 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 CATP04040 527 aaKnown RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 UQCRC2P22695 453 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 PBLDP30039 288 aaPredicted RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 ATP6V1E1P36543 226 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 SLC1A3P43003 542 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 SRP9P49458 86 aaKnown RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 EPHA5P54756 1037 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 SMIM11AP58511 58 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 HSF2Q03933 536 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 GRK1Q15835 563 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 CLEC12AQ5QGZ9 265 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 FAM109BQ6ICB4 259 aaPredicted RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 GAREM2Q75VX8 874 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 HDDC2Q7Z4H3 204 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 TEX47Q8TBZ9 253 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 APOBEC4Q8WW27 367 aaKnown RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 TMEM159Q96B96 161 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 PDXPQ96GD0 296 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 SORBS1Q9BX66 1292 aaKnown RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 PLA2G12AQ9BZM1 189 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 OR51J1Q9H342 316 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 IMP3Q9NV31 184 aaKnown RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 RDH8Q9NYR8 311 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 AUP1Q9Y679 476 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 CACNG2Q9Y698 323 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 IGLV3-16A0A075B6K0 115 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 TEX13CA0A0J9YWL9 993 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 IRGMA1A4Y4 181 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 DVL2O14641 736 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 SLC28A2O43868 658 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 CH25HO95992 272 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 DNASE1P24855 282 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 IMPA1P29218 277 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 MAPK8P45983 427 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 HSPB3Q12988 150 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 RIN1Q13671 783 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 PLA1AQ53H76 456 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 GPR139Q6DWJ6 353 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 FAM122CQ6P4D5 195 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 LILRA6Q6PI73 481 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 BHLHB9Q6PI77 547 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 BRAT1Q6PJG6 821 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 ZER1Q7Z7L7 766 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 TMEM150AQ86TG1 271 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 LILRA3Q8N6C8 439 aaPredicted RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 BEST4Q8NFU0 473 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 SP7Q8TDD2 431 aaPredicted RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 SCAMP4Q969E2 229 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 ART5Q96L15 291 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 ZNF354BQ96LW1 612 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 DPAGT1Q9H3H5 408 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 HEXA-AS1Q9H8Q6 139 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 FGF20Q9NP95 211 aaPredicted RBP8.4□□□□□ -1.06
SIK3-202ENST00000413553 HCFC1R1Q9NWW0 138 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 PTGFRNQ9P2B2 879 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 OR51B4Q9Y5P0 310 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 IRAK3Q9Y616 596 aa8.4□□□□□ -1.06
SIK3-202ENST00000413553 RPS10-NUDT3A0A1W2PQS6 291 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 CFL1P23528 166 aaKnown RBP8.4□□□□□ -1.07
SIK3-202ENST00000413553 SLC6A11P48066 632 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 CDH11P55287 796 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 DBPQ10586 325 aaPredicted RBP8.4□□□□□ -1.07
SIK3-202ENST00000413553 MAP4K2Q12851 820 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 PDE7AQ13946 482 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 DUSP6Q16828 381 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 CLLU1Q5K131 121 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 FAM71E1Q6IPT2 247 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 KIAA1161Q6NSJ0 714 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 CD200R1LQ6Q8B3 271 aa8.4□□□□□ -1.07
SIK3-202ENST00000413553 PRSS42Q7Z5A4 293 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms