RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CHN1P15882 459 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 CTSSP25774 331 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 DNAJA1P31689 397 aaKnown RBP13.43□□□□□ -0.26
CBX3-203ENST00000409747 HTR6P50406 440 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 ZNF136P52737 540 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 ZNF763Q0D2J5 394 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 SLC29A2Q14542 456 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 CEBPEQ15744 281 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 AAGABQ6PD74 315 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 APIPQ96GX9 242 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 ZFP3Q96NJ6 502 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 CRIM1Q9NZV1 1036 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 WIF1Q9Y5W5 379 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 PLOD3O60568 738 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 ANXA4P09525 319 aaPredicted RBP13.42□□□□□ -0.26
CBX3-203ENST00000409747 CT45A8P0DMV1 189 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 CT45A9P0DMV2 189 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 MYL2P10916 166 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 ART1P52961 327 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 WNT3P56703 355 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 IMPG1Q17R60 797 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 CT45A2Q5DJT8 189 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 SPDYAQ5MJ70 313 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 DCST1Q5T197 706 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 DESI1Q6ICB0 168 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 PLCZ1Q86YW0 608 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 CCNYL1Q8N7R7 359 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 WDSUB1Q8N9V3 476 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 KAT2AQ92830 837 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 C11orf24Q96F05 449 aaPredicted RBP13.42□□□□□ -0.26
CBX3-203ENST00000409747 VSTM2LQ96N03 204 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 BBS4Q96RK4 519 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 EBPLQ9BY08 206 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 CLEC4MQ9H2X3 399 aaPredicted RBP13.42□□□□□ -0.26
CBX3-203ENST00000409747 GSTO2Q9H4Y5 243 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 MID1IP1Q9NPA3 183 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 MIEF1Q9NQG6 463 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 TAS2R10Q9NYW0 307 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 TBK1Q9UHD2 729 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 TIMM22Q9Y584 194 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 KDM4EB2RXH2 506 aaPredicted RBP13.42□□□□□ -0.26
CBX3-203ENST00000409747 H0Y3Z8 333 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 CRCPO75575 148 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 DDCP20711 480 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 SRD5A2P31213 254 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 PNLIPRP2P54317 469 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 SORDQ00796 357 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 FAM219BQ5XKK7 198 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 POMZP3Q6PJE2 187 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 LARP4Q71RC2 724 aaKnown RBP eCLIP13.42□□□□□ -0.265e-13■■□□□ 14.4
CBX3-203ENST00000409747 FAM76AQ8TAV0 307 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 RMND5BQ96G75 393 aaPredicted RBP13.42□□□□□ -0.26
CBX3-203ENST00000409747 KCNA7Q96RP8 456 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 ADOQ96SZ5 270 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 TM9SF2Q99805 663 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 GPATCH1Q9BRR8 931 aaKnown RBP13.42□□□□□ -0.26
CBX3-203ENST00000409747 ACBD3Q9H3P7 528 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 FOLH1BQ9HBA9 442 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 RASSF1Q9NS23 344 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 DKKL1Q9UK85 242 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 GRID1Q9ULK0 1009 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 WBP11Q9Y2W2 641 aaKnown RBP13.42□□□□□ -0.26
CBX3-203ENST00000409747 OR10H1Q9Y4A9 318 aa13.42□□□□□ -0.26
CBX3-203ENST00000409747 C2orf72A6NCS6 295 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 TUBAL3A6NHL2 446 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 A6NNC1 897 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 EEF1E1-BLOC1S5C9J1V9 151 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 EEF1E1O43324 174 aaKnown RBP13.41□□□□□ -0.26
CBX3-203ENST00000409747 TSPAN2O60636 221 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 TMIGD3P0DMS9 266 aaPredicted RBP13.41□□□□□ -0.26
CBX3-203ENST00000409747 DGKQP52824 942 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 CORO7P57737 925 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 BTKQ06187 659 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 ZNF155Q12901 538 aaPredicted RBP13.41□□□□□ -0.26
CBX3-203ENST00000409747 CCDC153Q494R4 210 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 ZYG11AQ6WRX3 759 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 GOT1L1Q8NHS2 421 aaPredicted RBP13.41□□□□□ -0.26
CBX3-203ENST00000409747 CDC26Q8NHZ8 85 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 MZB1Q8WU39 189 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 RHOXF2Q9BQY4 288 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 SFXN3Q9BWM7 321 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 TXLNGYQ9BZA5 131 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 EPB41L4BQ9H329 900 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 PPCSQ9HAB8 311 aa13.41□□□□□ -0.26
CBX3-203ENST00000409747 MRPS18CQ9Y3D5 142 aaKnown RBP13.41□□□□□ -0.26
CBX3-203ENST00000409747 A0A087WV62 115 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 FAM221AA4D161 298 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 GOSR1O95249 250 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 FAM153BP0C7A2 387 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 CHMP24386 653 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 TACR1P25103 407 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 NTSP30990 170 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 CCT5P48643 541 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 GFRA1P56159 465 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 EEF1A1P68104 462 aaKnown RBP13.4□□□□□ -0.26
CBX3-203ENST00000409747 C2orf80Q0P641 193 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 SNTB1Q13884 538 aaKnown RBP13.4□□□□□ -0.26
CBX3-203ENST00000409747 FAM153CQ494X1 144 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 CFAP157Q5JU67 520 aa13.4□□□□□ -0.26
CBX3-203ENST00000409747 EEF1A1P5Q5VTE0 462 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms