RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 WSCD1Q658N2 575 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 MOB1BQ7L9L4 216 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 RANBP3LQ86VV4 465 aaPredicted RBP2.78□□□□□ -1.96
PMS1-203ENST00000409593 DNAJA3Q96EY1 480 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 C11orf24Q96F05 449 aaPredicted RBP2.78□□□□□ -1.96
PMS1-203ENST00000409593 C16orf74Q96GX8 76 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 ZNF285Q96NJ3 590 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 TECTBQ96PL2 329 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 C19orf24Q9BVV8 132 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 TMEM245Q9H330 911 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 ALG9Q9H6U8 611 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 HPS4Q9NQG7 708 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 MIOXQ9UGB7 285 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 CA5BQ9Y2D0 317 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 FAM231BA6NCW3 169 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 LRIT2A6NDA9 550 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 RTN2O75298 545 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 SDC1P18827 310 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 CCL11P51671 97 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 CKAP4Q07065 602 aaKnown RBP2.77□□□□□ -1.97
PMS1-203ENST00000409593 PPP1R8Q12972 351 aaKnown RBP2.77□□□□□ -1.97
PMS1-203ENST00000409593 DPY19L2P2Q6ZN68 376 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 ZNF410Q86VK4 478 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 TGIF2LYQ8IUE0 185 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 CENPSQ8N2Z9 138 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 SFRP1Q8N474 314 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 CHCHD4Q8N4Q1 142 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 COLGALT1Q8NBJ5 622 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 IMMP1LQ96LU5 166 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 TSPAN18Q96SJ8 248 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 KCNMB3Q9NPA1 279 aa2.77□□□□□ -1.97
PMS1-203ENST00000409593 PURGQ9UJV8 347 aaKnown RBP2.77□□□□□ -1.97
PMS1-203ENST00000409593 BARX2Q9UMQ3 279 aaPredicted RBP2.77□□□□□ -1.97
PMS1-203ENST00000409593 PDLIM1O00151 329 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 TLR4O00206 839 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 IGSF6O95976 241 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 SGSHP51688 502 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 CNN1P51911 297 aaKnown RBP2.76□□□□□ -1.97
PMS1-203ENST00000409593 KYAT1Q16773 422 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 SCARA5Q6ZMJ2 495 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 DLX4Q92988 240 aaPredicted RBP2.76□□□□□ -1.97
PMS1-203ENST00000409593 TMEM45BQ96B21 275 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 SLC25A38Q96DW6 304 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 DPH7Q9BTV6 452 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 TM2D1Q9BX74 207 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 EXOSC3Q9NQT5 275 aaKnown RBP2.76□□□□□ -1.97
PMS1-203ENST00000409593 PDE10AQ9Y233 779 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 RPH3AQ9Y2J0 694 aaPredicted RBP2.76□□□□□ -1.97
PMS1-203ENST00000409593 FKBP7Q9Y680 259 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 NPC1L1Q9UHC9 1359 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 CHD4Q14839 1912 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 TRBV7-9A0A0J9YWB2 115 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 HSF2BPO75031 334 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 LRP3O75074 770 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 IGLV1-47P01700 117 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 ZP3P21754 424 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 RFC2P35250 354 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 UGT1A3P35503 534 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 CASP3P42574 277 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 CASP9P55211 416 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 NME3Q13232 169 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 TFAP2EQ6VUC0 442 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 ADGRD2Q7Z7M1 963 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 DTD2Q96FN9 168 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 ZNF799Q96GE5 643 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 DHTKD1Q96HY7 919 aaPredicted RBP2.76□□□□□ -1.97
PMS1-203ENST00000409593 ZNF702PQ9H963 129 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 STARD5Q9NSY2 213 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 LHX3Q9UBR4 397 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 FAM153AQ9UHL3 310 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 DHRS7Q9Y394 339 aa2.76□□□□□ -1.97
PMS1-203ENST00000409593 MACROD2A1Z1Q3 448 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 H3BMH7 237 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 PDXKO00764 312 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 BUB1O43683 1085 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 NME2P1O60361 137 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 GOSR1O95249 250 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 HMOX1P09601 288 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 GNSP15586 552 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 SLC26A2P50443 739 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 C17orf67Q0P5P2 114 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 TSTA3Q13630 321 aaPredicted RBP2.75□□□□□ -1.97
PMS1-203ENST00000409593 CARTPTQ16568 116 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 CELF3Q5SZQ8 465 aaKnown RBP2.75□□□□□ -1.97
PMS1-203ENST00000409593 ANKRD23Q86SG2 305 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 PARGQ86W56 976 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 GPBP1Q86WP2 473 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 LEMD2Q8NC56 503 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 ZNF560Q96MR9 790 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 GLT8D2Q9H1C3 349 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 DCAF13Q9NV06 445 aaKnown RBP2.75□□□□□ -1.97
PMS1-203ENST00000409593 ELOVL2Q9NXB9 296 aa2.75□□□□□ -1.97
PMS1-203ENST00000409593 NPIPA2E9PIF3 369 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 WWP2O00308 870 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 EMC8O43402 210 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 PRB2P02812 416 aaPredicted RBP2.74□□□□□ -1.97
PMS1-203ENST00000409593 NF2P35240 595 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 STK19P49842 368 aaPredicted RBP2.74□□□□□ -1.97
PMS1-203ENST00000409593 GFPT1Q06210 699 aaPredicted RBP2.74□□□□□ -1.97
PMS1-203ENST00000409593 RAB35Q15286 201 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms