RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 GKN2Q86XP6 184 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 SLC2A4RGQ9NR83 387 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 CYP8B1Q9UNU6 501 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ZNF175Q9Y473 711 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 OR5K4A6NMS3 321 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 C11orf98E9PRG8 122 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 TP53I11O14683 189 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 HCRTO43612 131 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 UBBP0CG47 229 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 UBCP0CG48 685 aaKnown RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 PBX2P40425 430 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 IDH3GP51553 393 aaPredicted RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 KCNJ8Q15842 424 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 KIAA0319Q5VV43 1072 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 OR4C11Q6IEV9 310 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 P4HA3Q7Z4N8 544 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 TMEM185AQ8NFB2 350 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 C16orf78Q8WTQ4 265 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 EVA1AQ9H8M9 152 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 KRBOX1C9JBD0 128 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ALDOBP05062 364 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 GMPRP36959 345 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 PRPS1P60891 318 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 CLDN10P78369 228 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ELOAQ14241 798 aaKnown RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 CLECL1Q8IZS7 167 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 DTX3Q8N9I9 347 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 SLC41A3Q96GZ6 507 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 PRRT1Q99946 306 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ICKQ9UPZ9 632 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 NDUFB2O95178 105 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ATE1O95260 518 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 STATHP02808 62 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 CHRNB1P11230 501 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 IFNGR1P15260 489 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 SLC5A2P31639 672 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 THBS2P35442 1172 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 MMP12P39900 470 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ARSDP51689 593 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ERVK-25P63136 954 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 MLLT11Q13015 90 aaPredicted RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 GPR157Q5UAW9 335 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 LINC00299Q6ZSB3 139 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 OR5D16Q8NGK9 328 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 OR5W2Q8NH69 310 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 STK35Q8TDR2 534 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 PGAP3Q96FM1 320 aaPredicted RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 FAM46AQ96IP4 442 aaKnown RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 ABRACLQ9P1F3 81 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 LRFN1Q9P244 771 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 INSL5Q9Y5Q6 135 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 KLK3P07288 261 aaPredicted RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 ZNF35P13682 527 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 UBA52P62987 128 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 PEA15Q15121 130 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 AGAP7PQ5VUJ5 663 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 CGB2Q6NT52 195 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 TMEM107Q6UX40 140 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 MAMDC2Q7Z304 686 aaPredicted RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 NRMQ8IXM6 262 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 SVBPQ8N300 66 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 PARP16Q8N5Y8 322 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 B3GNT7Q8NFL0 401 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 DCUN1D4Q92564 292 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 A0A1W2PQ09 198 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 TSTD3H0UI37 97 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 RPS17P08708 135 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 RNH1P13489 461 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 PTPN6P29350 595 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 MFSD13AQ14CX5 517 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 LARP4Q71RC2 724 aaKnown RBP eCLIP12.31□□□□□ -0.44
RNF43-201ENST00000407977 OTOP2Q7RTS6 562 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 TPRA1Q86W33 373 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 ESX1Q8N693 406 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 GPR148Q8TDV2 347 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 F2RL3Q96RI0 385 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 ACTRT3Q9BYD9 372 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 KCNJ13O60928 360 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 CLEC3AO75596 197 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 APBB3O95704 486 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 TFAP2AP05549 437 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 MC2RQ01718 297 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 PGAP1Q75T13 922 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 RASGRP3Q8IV61 690 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 BRIX1Q8TDN6 353 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 DKKL1Q9UK85 242 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 THEGLP0DJG4 465 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 HTR6P50406 440 aa12.31□□□□□ -0.44
RNF43-201ENST00000407977 ZNF169Q14929 603 aaPredicted RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 ZNF704Q6ZNC4 412 aaPredicted RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 ERN2Q76MJ5 926 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 DAZLQ92904 295 aaKnown RBP12.31□□□□□ -0.44
RNF43-201ENST00000407977 RELTQ969Z4 430 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms