RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 TIMP2P16035 220 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 SPCS3P61009 180 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 SGCGQ13326 291 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 TNK1Q13470 666 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 NAE1Q13564 534 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ZNF630Q2M218 657 aaPredicted RBP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 TRIM40Q6P9F5 258 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 TIGD4Q8IY51 512 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 AVL9Q8NBF6 648 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 SLC25A46Q96AG3 418 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 MED8Q96G25 268 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 NPAS1Q99742 590 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ZNF251Q9BRH9 671 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 C11orf54Q9H0W9 315 aaPredicted RBP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 REEP4Q9H6H4 257 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ZDHHC6Q9H6R6 413 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 CXXC1Q9P0U4 656 aaPredicted RBP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 MAP4K5Q9Y4K4 846 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 TRBC2A0A5B9 178 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ARHGEF33A8MVX0 844 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 B4DXG7 233 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 TPST2O60704 377 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 CSF3P09919 207 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ZNF8P17098 575 aaPredicted RBP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 MAP2K6P52564 334 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 SLC5A12Q1EHB4 618 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ASTLQ6HA08 431 aaPredicted RBP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 FAM131AQ6UXB0 335 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 GDPD4Q6W3E5 623 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 VWA5B2Q8N398 1253 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ELP4Q96EB1 424 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 MND1Q9BWT6 205 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 POLR2J2Q9GZM3 115 aaKnown RBP15.44■□□□□ 0.06
CDK11B-204ENST00000407249 SYNDIG1Q9H7V2 258 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 ABCB9Q9NP78 766 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 DNAJC27Q9NZQ0 273 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 KCND3Q9UK17 655 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 SNX11Q9Y5W9 270 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 PLXNB3Q9ULL4 1909 aa15.44■□□□□ 0.06
CDK11B-204ENST00000407249 A0A0B4J293 547 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 TTLL8A6PVC2 850 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 ABCD4O14678 606 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 FFAR1O14842 300 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 SGCEO43556 437 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 SLC22A5O76082 557 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 ALPPP05187 535 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 CD63P08962 238 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 FEN1P39748 380 aaKnown RBP15.43■□□□□ 0.06
CDK11B-204ENST00000407249 NNMTP40261 264 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 KRBOX4Q5JUW0 171 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 TMEM201Q5SNT2 666 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 SLC35F1Q5T1Q4 408 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 CFAP161Q6P656 301 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 AGTRAPQ6RW13 159 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 NANOGP1Q8N7R0 232 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 CREB3L4Q8TEY5 395 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 RNF31Q96EP0 1072 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 MCOLN1Q9GZU1 580 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 SHARPINQ9H0F6 387 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 MIXL1Q9H2W2 232 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 LDAHQ9H6V9 325 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 PRM3Q9NNZ6 103 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 CTSFQ9UBX1 484 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 NDOR1Q9UHB4 597 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 SSR3Q9UNL2 185 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 PLCL2Q9UPR0 1127 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 A0A0G2JPF8 293 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 TSPAN11A1L157 253 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 HNRNPCL3B7ZW38 293 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 LGI1O95970 557 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 AGR2O95994 175 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 IFNW1P05000 195 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 HNRNPCL4P0DMR1 293 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 MYL9P24844 172 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 PTAFRP25105 342 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 RPS13P62277 151 aaKnown RBP15.43■□□□□ 0.06
CDK11B-204ENST00000407249 MXD1Q05195 221 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 RGS1Q08116 209 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 ZNF763Q0D2J5 394 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 TMEM95Q3KNT9 176 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 PROKR2Q8NFJ6 384 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 OR5AK3PQ8NH89 298 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 NANPQ8TBE9 248 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 WFIKKN2Q8TEU8 576 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 BTN2A2Q8WVV5 523 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 LRIG1Q96JA1 1093 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 MSLNLQ96KJ4 702 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 SLC6A18Q96N87 628 aa15.43■□□□□ 0.06
CDK11B-204ENST00000407249 WRAP53Q9BUR4 548 aaKnown RBP15.43■□□□□ 0.06
CDK11B-204ENST00000407249 TMEM121BQ9BXQ6 578 aaPredicted RBP15.43■□□□□ 0.06
CDK11B-204ENST00000407249 TRBV4-1A0A0J9YWV2 114 aa15.42■□□□□ 0.06
CDK11B-204ENST00000407249 EFCAB7A8K855 629 aa15.42■□□□□ 0.06
CDK11B-204ENST00000407249 ADAP00813 363 aa15.42■□□□□ 0.06
CDK11B-204ENST00000407249 OSMP13725 252 aa15.42■□□□□ 0.06
CDK11B-204ENST00000407249 MLLT11Q13015 90 aaPredicted RBP15.42■□□□□ 0.06
CDK11B-204ENST00000407249 PUM1Q14671 1186 aaKnown RBP eCLIP15.42■□□□□ 0.061e-7■■□□□ 11.7
CDK11B-204ENST00000407249 MPEG1Q2M385 716 aa15.42■□□□□ 0.06
CDK11B-204ENST00000407249 LIPKQ5VXJ0 399 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms