RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 KLF5Q13887 457 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 P2RY14Q15391 338 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 CAMK4Q16566 473 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 C18orf65Q6ZTR6 163 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 GPBP1Q86WP2 473 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 TBC1D10CQ8IV04 446 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 OR4N5Q8IXE1 308 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 CENPLQ8N0S6 344 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 LINC00518Q8N0U6 118 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 CNPY4Q8N129 248 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 FAM76AQ8TAV0 307 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 FBXO30Q8TB52 745 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 FBXO25Q8TCJ0 367 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 P3H4Q92791 437 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 FBXO17Q96EF6 278 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 LRR1Q96L50 414 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 ANKRD27Q96NW4 1050 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 DEFB118Q96PH6 123 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF300Q96RE9 604 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 TXN2Q99757 166 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 JPH2Q9BR39 696 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 OVOL2Q9BRP0 275 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 CLSTN2Q9H4D0 955 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 GTSE1Q9NYZ3 720 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 TMOD2Q9NZR1 351 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 MIOXQ9UGB7 285 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 TUBGCP4Q9UGJ1 667 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 NAP1L2Q9ULW6 460 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 DUSP12Q9UNI6 340 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF175Q9Y473 711 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 TOGARAM1Q9Y4F4 1720 aa4.07□□□□□ -1.76
HMGB3P18-201ENST00000406327 COL22A1Q8NFW1 1626 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLIT2O94813 1529 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ATRNO75882 1429 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 CARMIL3Q8ND23 1372 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 OR5H15A6NDH6 313 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ANHXE9PGG2 379 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 E9PMD0 336 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 K7EQD1 137 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SGK494L7N484 410 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 E2F3O00716 465 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 TRAFD1O14545 582 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SH2D1BO14796 132 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 CTAGE5O15320 804 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 CHADO15335 359 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 CSO75390 466 aaKnown RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ADCY5O95622 1261 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 PATE4P0C8F1 98 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 THRBP10828 461 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 IL4RP24394 825 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 CYP2F1P24903 491 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 MSNP26038 577 aaKnown RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 PTPN6P29350 595 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 AXLP30530 894 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SOX6P35712 828 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 OVGP1Q12889 678 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 CLPPQ16740 277 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZSWIM7Q19AV6 140 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 PARP6Q2NL67 630 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ACSF3Q4G176 576 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 LIPKQ5VXJ0 399 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 BSPRYQ5W0U4 402 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 PWWP2BQ6NUJ5 590 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLC25A24Q6NUK1 477 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 LCLAT1Q6UWP7 414 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 C3P1Q6ZMU1 363 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 DPY19L2P2Q6ZN68 376 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 FRRS1Q6ZNA5 592 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 GPR142Q7Z601 462 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ITIH5Q86UX2 942 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ADAD2Q8NCV1 583 aaKnown RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 OR10T2Q8NGX3 314 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SPPL2AQ8TCT8 520 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 RAB7BQ96AH8 199 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 C8orf76Q96K31 380 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 DUX3Q96PT4 197 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ACCSQ96QU6 501 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 TSPAN18Q96SJ8 248 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 RAB11FIP5Q9BXF6 653 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 YAE1D1Q9NRH1 226 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 WWOXQ9NZC7 414 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 LAMP5Q9UJQ1 280 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLC6A5Q9Y345 797 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ATG4BQ9Y4P1 393 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ANGPTL3Q9Y5C1 460 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 NUP188Q5SRE5 1749 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 ABCA3Q99758 1704 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 SHANK3Q9BYB0 1731 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 COL16A1Q07092 1604 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 LTBP4Q8N2S1 1624 aa4.06□□□□□ -1.76
HMGB3P18-201ENST00000406327 AFF2P51816 1311 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 TJP1Q07157 1748 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 LOC105371242A0A075B767 164 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 SH3PXD2BA1X283 911 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 A8MU76 341 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 PRKAB2O43741 272 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 YEATS4O95619 227 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 PCCBP05166 539 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms