RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 BBS1Q8NFJ9 593 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 BBS10Q8TAM1 723 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 SFXN5Q8TD22 340 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 TMEM203Q969S6 136 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 FAM131CQ96AQ9 280 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 MED18Q9BUE0 208 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 BTBD1Q9H0C5 482 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 B3GAT2Q9NPZ5 323 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 MRPS23Q9Y3D9 190 aaKnown RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 CMAHPQ9Y471 501 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 HLA-DQB1P01920 261 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 ZGLP1P0C6A0 271 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 C8orf89P0DMQ9 161 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 TCEA1P23193 301 aaKnown RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 AZGP1P25311 298 aaKnown RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 SDC2P34741 201 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 WNT4P56705 351 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 HNRNPA0Q13151 305 aaKnown RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 PLK5Q496M5 336 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 EXOSC6Q5RKV6 272 aaKnown RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 HEPHL1Q6MZM0 1159 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 SLC48A1Q6P1K1 146 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 NKAIN4Q8IVV8 208 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 ACOT4Q8N9L9 421 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 OR2L8Q8NGY9 312 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 RASSF5Q8WWW0 418 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 GATAD2BQ8WXI9 593 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 PINK1Q9BXM7 581 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 NEK6Q9HC98 313 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 KLHL20Q9Y2M5 609 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 DNMT3AQ9Y6K1 912 aaPredicted RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 CDC42EP2O14613 210 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 SURF4O15260 269 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 PROM1O43490 865 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 HRO43593 1189 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 FCMRO60667 390 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 LYPD3O95274 346 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 SOX9P48436 509 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 ASAH1Q13510 395 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 DUSP6Q16828 381 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 SPDYE7PQ495Y7 208 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 TMEM240Q5SV17 173 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 ZNF425Q6IV72 752 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CASP12Q6UXS9 341 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CCDC116Q8IYX3 515 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CLDN22Q8N7P3 220 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 OR52E1Q8NGJ3 308 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 RNFT2Q96EX2 444 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 PLA2G2FQ9BZM2 168 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 MMP28Q9H239 520 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 TIGARQ9NQ88 270 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 SLC2A10O95528 541 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 FHP07954 510 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 ACP5P13686 325 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 PSMA1P25786 263 aaKnown RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 TIE1P35590 1138 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 HSD17B2P37059 387 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 MC3RP41968 323 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 KHKP50053 298 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 OR2B6P58173 313 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 ERVK-21P61565 698 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 MINDY4Q4G0A6 757 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 VITQ6UXI7 678 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 WDR88Q6ZMY6 472 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 RDH10Q8IZV5 341 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 OR2L3Q8NG85 312 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 OR9A2Q8NGT5 310 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 OR52P1PQ8NH57 321 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 FAM46AQ96IP4 442 aaKnown RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 C12orf66Q96MD2 445 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 FCRL4Q96PJ5 515 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 PCBD2Q9H0N5 130 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 C11orf54Q9H0W9 315 aaPredicted RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 PPP1R3EQ9H7J1 279 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 DEC1Q9P2X7 70 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 TMA7Q9Y2S6 64 aaKnown RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 CFAP54Q96N23 3096 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 PNMA8CA0A1B0GUJ8 204 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 A0A1W2PQL4 384 aaPredicted RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 CASC3O15234 703 aaKnown RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 PRODHO43272 600 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 IGHA1P01876 353 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 NR2F1P10589 423 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 CXCR2P25025 360 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 FGF9P31371 208 aaPredicted RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 SSR2P43308 183 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 RAB28P51157 221 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 PDX1P52945 283 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 ARFIP1P53367 373 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 RAB40BQ12829 278 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 ZNF730Q6ZMV8 503 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 FRRS1Q6ZNA5 592 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 USP30Q70CQ3 517 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 VN1R4Q7Z5H5 301 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 GLCCI1Q86VQ1 547 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 ZFP41Q8N8Y5 198 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 ZFPM2Q8WW38 1151 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 JPH3Q8WXH2 748 aaPredicted RBP9.22□□□□□ -0.93
MSH2-202ENST00000406134 ELP4Q96EB1 424 aa9.22□□□□□ -0.93
MSH2-202ENST00000406134 RSPH9Q9H1X1 276 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms