RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 ALDH4A1P30038 563 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 EXOSC7Q15024 291 aaKnown RBP27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 EXOSC6Q5RKV6 272 aaKnown RBP27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 PARP8Q8N3A8 854 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 FAM81AQ8TBF8 368 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 SLC7A13Q8TCU3 470 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 ISOC1Q96CN7 298 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 CTPS2Q9NRF8 586 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 LRIT1Q9P2V4 623 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 KLHL3Q9UH77 587 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 RHPN2P1A8MT19 583 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 TPST2O60704 377 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 MYF5P13349 255 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 MAT1AQ00266 395 aaKnown RBP27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 DUSP21Q9H596 190 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 MAN2C1Q9NTJ4 1040 aa27.05■■□□□ 1.92
CSNK1E-205ENST00000405675 FAAHO00519 579 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 PLOD3O60568 738 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 UGT2B17O75795 530 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 CFIP05156 583 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 SLC35A2P78381 396 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 LSAMPQ13449 338 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 PROX2Q3B8N5 592 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 GPR107Q5VW38 600 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 GATAD2AQ86YP4 633 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 SLC35F3Q8IY50 421 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 OR13F1Q8NGS4 319 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 MPP4Q96JB8 637 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 ZNF285Q96NJ3 590 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 ARHGDIGQ99819 225 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 TUBA1CQ9BQE3 449 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 LHPPQ9H008 270 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 SOHLH2Q9NX45 425 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 SLC6A14Q9UN76 642 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 PCDH15Q96QU1 1955 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 A0A087WV62 115 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 MLLT3P42568 568 aaPredicted RBP27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 ARHGAP11BQ3KRB8 267 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 CCNJQ5T5M9 372 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 TYW3Q6IPR3 259 aaKnown RBP27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 GALNT15Q8N3T1 639 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 FNDC11Q9BVV2 318 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 CCDC90BQ9GZT6 254 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 NAA50Q9GZZ1 169 aaKnown RBP27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 FTSJ1Q9UET6 329 aa27.04■■□□□ 1.92
CSNK1E-205ENST00000405675 CACNA1EQ15878 2313 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 VPS13AQ96RL7 3174 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 SH3PXD2BA1X283 911 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 TLCD2A6NGC4 264 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 TGFBR3LH3BV60 316 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 OR10H3O60404 316 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 PCMT1P22061 227 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 HPCAP84074 193 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 SYT16Q17RD7 645 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 HLA-BQ31612 363 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 TMEM236Q5W0B7 351 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 GTF2IRD2BQ6EKJ0 949 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 PODNL1Q6PEZ8 512 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 GTF2IRD2Q86UP8 949 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 CLIP4Q8N3C7 705 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 OR52P1PQ8NH57 321 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 ZNF675Q8TD23 568 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 VCX3AQ9NNX9 186 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 ZNF226Q9NYT6 803 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 PLCL2Q9UPR0 1127 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 TPRKBQ9Y3C4 175 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 SPTBP11277 2137 aa27.03■■□□□ 1.92
CSNK1E-205ENST00000405675 M0R129 80 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SYT5O00445 386 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 FAM20BO75063 409 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 AGR2O95994 175 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 IDH2P48735 452 aaKnown RBP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 OR1D5P58170 312 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PGBD2Q6P3X8 592 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 CCDC103Q8IW40 242 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PEX11GQ96HA9 241 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PRRC1Q96M27 445 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PIGUQ9H490 435 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 REV1Q9UBZ9 1251 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SNX5Q9Y5X3 404 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 A0A1W2PRQ8 180 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PATE3B3GLJ2 98 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SEC14L2O76054 403 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 OXSR1O95747 527 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 ADAP00813 363 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SP9P0CG40 484 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 CHMP24386 653 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 EPHA8P29322 1005 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SMIM11AP58511 58 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 LSM11P83369 360 aaKnown RBP eCLIP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 DGCR6Q14129 220 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PTGES3Q15185 160 aaKnown RBP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PEAR1Q5VY43 1037 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 METTL27Q8N6F8 245 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 PIK3R3Q92569 461 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 CTHRC1Q96CG8 243 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SDF2Q99470 211 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SPRTNQ9H040 489 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 SCN3BQ9NY72 215 aa27.02■■□□□ 1.92
CSNK1E-205ENST00000405675 WDFY4Q6ZS81 3184 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms