RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ITGA2P17301 1181 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 SOX18P35713 384 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 GABREP78334 506 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 ZNHIT3Q15649 155 aaPredicted RBP19.57■□□□□ 0.72
TPM1-208ENST00000404484 RPS26P11Q5JNZ5 115 aaPredicted RBP19.57■□□□□ 0.72
TPM1-208ENST00000404484 C3orf38Q5JPI3 329 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 EXOSC6Q5RKV6 272 aaKnown RBP19.57■□□□□ 0.72
TPM1-208ENST00000404484 HEPHL1Q6MZM0 1159 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 SVOPLQ8N434 492 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 OR10Q1Q8NGQ4 319 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 SPPL2AQ8TCT8 520 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 COL21A1Q96P44 957 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 COQ10BQ9H8M1 238 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 CACYBPQ9HB71 228 aaKnown RBP19.57■□□□□ 0.72
TPM1-208ENST00000404484 NECTIN3Q9NQS3 549 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 C14orf105Q9NVL8 296 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 SEC14L3Q9UDX4 400 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 OAZ3Q9UMX2 235 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 NUP210LQ5VU65 1888 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 IGKV3D-11A0A0A0MRZ8 115 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 PRAMEF27A3QJZ7 478 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 TTC36A6NLP5 189 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 BRINP1O60477 761 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 DPM1O60762 260 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 MFN2O95140 757 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 CBX7O95931 251 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 ONECUT2O95948 504 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 ZNF23P17027 643 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 DCDP81605 110 aaKnown RBP19.56■□□□□ 0.72
TPM1-208ENST00000404484 MC2RQ01718 297 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 OCA2Q04671 838 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 FUT5Q11128 374 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 ZNF155Q12901 538 aaPredicted RBP19.56■□□□□ 0.72
TPM1-208ENST00000404484 NKAIN1Q4KMZ8 207 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 SFT2D3Q587I9 215 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 WLSQ5T9L3 541 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 PPP4R4Q6NUP7 873 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 SLC16A11Q8NCK7 471 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 OR7G1Q8NGA0 311 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 OR52R1Q8NGF1 315 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 PROX1Q92786 737 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 OTUB1Q96FW1 271 aaPredicted RBP19.56■□□□□ 0.72
TPM1-208ENST00000404484 SLC35A4Q96G79 324 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 LIN37Q96GY3 246 aaPredicted RBP19.56■□□□□ 0.72
TPM1-208ENST00000404484 OCIAD1Q9NX40 245 aa19.56■□□□□ 0.72
TPM1-208ENST00000404484 IGLV3-12A0A075B6K2 115 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 TMEM229AB2RXF0 380 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 AGRPO00253 132 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 CPNE3O75131 537 aaKnown RBP19.55■□□□□ 0.72
TPM1-208ENST00000404484 H6PDO95479 791 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 CHRM4P08173 479 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 ACP2P11117 423 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 ZNF26P17031 533 aaPredicted RBP19.55■□□□□ 0.72
TPM1-208ENST00000404484 TNNI3P19429 210 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 ATP6V1C1P21283 382 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 RORAP35398 523 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 AQP4P55087 323 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 RHAGQ02094 409 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 KCNC4Q03721 635 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 ZNF267Q14586 743 aaPredicted RBP19.55■□□□□ 0.72
TPM1-208ENST00000404484 EXOSC7Q15024 291 aaKnown RBP19.55■□□□□ 0.72
TPM1-208ENST00000404484 DUSP5Q16690 384 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 ARHGAP11BQ3KRB8 267 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 OR2T5Q6IEZ7 315 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 DGAT2L6Q6ZPD8 337 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 OR2T29Q8NH02 315 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 WDR36Q8NI36 951 aaKnown RBP19.55■□□□□ 0.72
TPM1-208ENST00000404484 CDS1Q92903 461 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 C7orf34Q96L11 122 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 ZNF347Q96SE7 839 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 STRADBQ9C0K7 418 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 FBXO8Q9NRD0 319 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 THSD1Q9NS62 852 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 PCDHGA8Q9Y5G5 932 aa19.55■□□□□ 0.72
TPM1-208ENST00000404484 CCDC187A0A096LP49 1063 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 B4E171 279 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 SEC16AO15027 2179 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 E2F6O75461 281 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 S1PR1P21453 382 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 TSPAN7P41732 249 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 VLDLRP98155 873 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 FUT7Q11130 342 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 ELAVL1Q15717 326 aaKnown RBP19.54■□□□□ 0.72
TPM1-208ENST00000404484 COX15Q7KZN9 410 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 ZDHHC13Q8IUH4 622 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 GALNT4Q8N4A0 578 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 COX18Q8N8Q8 333 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 BMPERQ8N8U9 685 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 SMYD1Q8NB12 490 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 CHDHQ8NE62 594 aaPredicted RBP19.54■□□□□ 0.72
TPM1-208ENST00000404484 HOXB13Q92826 284 aaPredicted RBP19.54■□□□□ 0.72
TPM1-208ENST00000404484 TMBIM1Q969X1 311 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 CMKLR1Q99788 373 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 CNPPD1Q9BV87 410 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 Q9H521 79 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 RUBCNLQ9H714 662 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 NTN4Q9HB63 628 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 PRODH2Q9UF12 536 aa19.54■□□□□ 0.72
TPM1-208ENST00000404484 HEMK1Q9Y5R4 338 aaPredicted RBP19.54■□□□□ 0.72
TPM1-208ENST00000404484 TCRBV16S1A1N1A0A5B0 115 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms