RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PRF1P14222 555 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 DDCP20711 480 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 EFNA1P20827 205 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ENDOUP21128 410 aaKnown RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 GDF1P27539 372 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 HTR1EP28566 365 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 MC3RP41968 323 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 CASP3P42574 277 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 MASP1P48740 699 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 MAN2A2P49641 1150 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 NCBP2P52298 156 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 SMSP52788 366 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 NRG3P56975 720 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 NUP107P57740 925 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 NAA20P61599 178 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 RPL38P63173 70 aaKnown RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF844Q08AG5 666 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF763Q0D2J5 394 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 PLCXD2Q0VAA5 305 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF155Q12901 538 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ART3Q13508 389 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC10A1Q14973 349 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 HEPACAMQ14CZ8 416 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 KIAA0040Q15053 153 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 HYAL4Q2M3T9 481 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 KRT71Q3SY84 523 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 GALNTL6Q49A17 601 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 GXYLT1Q4G148 440 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF385BQ569K4 471 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ARL13AQ5H913 290 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 FNDC7Q5VTL7 733 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 CES4AQ5XG92 561 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 KANK2Q63ZY3 851 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 NOXRED1Q6NXP6 359 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF585AQ6P3V2 769 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 MTFR2Q6P444 385 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TMEM107Q6UX40 140 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 NPSR1Q6W5P4 371 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 RGS9BPQ6ZS82 235 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 Q6ZSR9 355 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 C8orf86Q6ZUL3 223 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 WDR53Q7Z5U6 358 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 BTLAQ7Z6A9 289 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 CCDC71Q8IV32 467 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 DDIASQ8IXT1 998 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 DND1Q8IYX4 353 aaKnown RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAM9CQ8IZT9 166 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 CNPY4Q8N129 248 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF675Q8TD23 568 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TWIST2Q8WVJ9 160 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 HGDQ93099 445 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TMBIM1Q969X1 311 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TP53INP1Q96A56 240 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 OMA1Q96E52 524 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 LCORQ96JN0 433 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 PKNOX2Q96KN3 472 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF597Q96LX8 424 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TSSK3Q96PN8 268 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 VKORC1Q9BQB6 163 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ROPN1BQ9BZX4 212 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 CENPHQ9H3R5 247 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ROPN1Q9HAT0 212 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 FOLH1BQ9HBA9 442 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 LRTM1Q9HBL6 345 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 GALNT9Q9HCQ5 603 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZFP64Q9NPA5 681 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 MYNNQ9NPC7 610 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 MIEF1Q9NQG6 463 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 GIMAP4Q9NUV9 329 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 C1orf109Q9NX04 203 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 SIRT5Q9NXA8 310 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ALKBH4Q9NXW9 302 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 SENP1Q9P0U3 644 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 BAIAP2L1Q9UHR4 511 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ACAD8Q9UKU7 415 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 BOKQ9UMX3 212 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAM215AQ9Y5M1 114 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 DNAJC15Q9Y5T4 150 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 NUP214P35658 2090 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 A0A1B0GVC2 190 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ANKRD33BA6NCL7 494 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 NKX2-6A6NCS4 301 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 FRG2CA6NGY1 282 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 FAM90A27PA6NNH2 459 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CAPN14A8MX76 684 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 KDM4EB2RXH2 506 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 H3BQF6 201 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 SLC28A1O00337 649 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 AQP7O14520 342 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ACOX3O15254 700 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 RGS16O15492 202 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 RGS14O43566 566 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TYROBPO43914 113 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 NPHS1O60500 1241 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ICOSLGO75144 302 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ANKRD17O75179 2603 aaKnown RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 UGT2B11O75310 529 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ERN1O75460 977 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms