RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 SPP1P10451 314 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 CLDN20P56880 219 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ZNF616Q08AN1 781 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ZNF697Q5TEC3 545 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 GPR139Q6DWJ6 353 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 MBOAT1Q6ZNC8 495 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 IQCHQ86VS3 1027 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 OR2T11Q8NH01 316 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 MFSD8Q8NHS3 518 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 AUTS2Q8WXX7 1259 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 SLC35A5Q9BS91 424 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 YIPF4Q9BSR8 244 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 CFAP97Q9P2B7 532 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 NDRG3Q9UGV2 375 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 F5H5P2 479 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 S1PR4O95977 384 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 S100A8P05109 93 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 HOXD4P09016 255 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 PPP3CBP16298 524 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 PPIBP23284 216 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 CPT2P23786 658 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 PSMD8P48556 350 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 LHX1P48742 406 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 WNT4P56705 351 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ZNF91Q05481 1191 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ARHGAP1Q07960 439 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 HSPB3Q12988 150 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 FIGNL1Q6PIW4 674 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 GPR149Q86SP6 731 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 CDK20Q8IZL9 346 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ACBD4Q8NC06 268 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 PTP4A1Q93096 173 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 WNT2BQ93097 391 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 CDKN2AIPNLQ96HQ2 116 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 KCNH6Q9H252 994 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 EVA1AQ9H8M9 152 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 NOX3Q9HBY0 568 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ALPPP05187 535 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 BCHEP06276 602 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 RAB6AP20340 208 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 PTAFRP25105 342 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 AFF3P51826 1226 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 RBBP4Q09028 425 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 TAF1AQ15573 450 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 OR5M10Q6IEU7 315 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 MTSS1LQ765P7 747 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 GEMIN6Q8WXD5 167 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 COL26A1Q96A83 441 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 MICU1Q9BPX6 476 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 SLC25A51Q9H1U9 297 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 RDH14Q9HBH5 336 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 DERAQ9Y315 318 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 A0A1B0GTL3 188 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 WNT9AO14904 365 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 CSO75390 466 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 THP07101 528 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 MECP2P51608 486 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 FXYD6P3P58550 94 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 S100A10P60903 97 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 NOGQ13253 232 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 ESPNLQ6ZVH7 1005 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 FAM124AQ86V42 546 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 RIMKLAQ8IXN7 391 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 GPR135Q8IZ08 494 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 OR4M1Q8NGD0 313 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 FAM193BQ96PV7 902 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 SLC19A3Q9BZV2 496 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 MRM3Q9HC36 420 aaKnown RBP13.04□□□□□ -0.32
RUNX3-203ENST00000399916 SCML2Q9UQR0 700 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 SNX11Q9Y5W9 270 aa13.04□□□□□ -0.32
RUNX3-203ENST00000399916 RBBP6Q7Z6E9 1792 aaKnown RBP13.03□□□□□ -0.32
RUNX3-203ENST00000399916 PIRO00625 290 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 BET1O15155 118 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 PCDH7O60245 1069 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 PTX3P26022 381 aaPredicted RBP13.03□□□□□ -0.32
RUNX3-203ENST00000399916 HMGCLP35914 325 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 SEMA3BQ13214 749 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 UBE2R2Q712K3 238 aaPredicted RBP13.03□□□□□ -0.32
RUNX3-203ENST00000399916 RNF44Q7L0R7 432 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 OR10H5Q8NGA6 315 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 MAP3K3Q99759 626 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 MGME1Q9BQP7 344 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 OR51I1Q9H343 314 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 SYNPO2LQ9H987 977 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 NMNAT1Q9HAN9 279 aaPredicted RBP13.03□□□□□ -0.32
RUNX3-203ENST00000399916 ATP13A1Q9HD20 1204 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 SLC25A13Q9UJS0 675 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 PSMD9O00233 223 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 LRRTM2O43300 516 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 IFNA6P05013 189 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 FGF4P08620 206 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 SAGP10523 405 aaPredicted RBP13.03□□□□□ -0.32
RUNX3-203ENST00000399916 ACHEP22303 614 aa13.03□□□□□ -0.32
RUNX3-203ENST00000399916 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.32
RUNX3-203ENST00000399916 PYCR1P32322 319 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms