RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 DUS3LQ96G46 650 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 KCMF1Q9P0J7 381 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 VILLO15195 856 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 HCRTR2O43614 444 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 TFPTP0C1Z6 253 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 GKN3PP0CG01 181 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 RACK1P63244 317 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 MAT1AQ00266 395 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 MSRB3Q8IXL7 192 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 OR6C4Q8NGE1 309 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 PIK3R3Q92569 461 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 UFD1Q92890 307 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 DAZLQ92904 295 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 TMEM38AQ9H6F2 299 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 DDX31Q9H8H2 851 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 NDUFAF4Q9P032 175 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 EPHA6Q9UF33 1036 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 SRPX2O60687 465 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 STT3AP46977 705 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 SLC14A1Q13336 389 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 PTGES3Q15185 160 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 RSBN1Q5VWQ0 802 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 FRMPD2BQ6IN97 320 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 SYNPOQ8N3V7 929 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 C19orf47Q8N9M1 422 aaKnown RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 DNAJA3Q96EY1 480 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 TUBA1CQ9BQE3 449 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 PINK1Q9BXM7 581 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 LHPPQ9H008 270 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 ERVK-19Q9WJR5 959 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 TMEM5Q9Y2B1 443 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 SNX11Q9Y5W9 270 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 C9J4A7 227 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 J3QRK9 145 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 SNX4O95219 450 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 OR5F1O95221 314 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF3P17036 446 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 PCYT1AP49585 367 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 COX10Q12887 443 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 KEAP1Q14145 624 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 MAD2L1BPQ15013 274 aaPredicted RBP13.19□□□□□ -0.3
SCAF4-202ENST00000399804 TPRG1LQ5T0D9 272 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 LINC01555Q8NAE3 123 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 OR2T33Q8NG76 320 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 SFXN5Q8TD22 340 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 AP3S1Q92572 193 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 KCNS3Q9BQ31 491 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 PELOQ9BRX2 385 aaKnown RBP13.19□□□□□ -0.3
SCAF4-202ENST00000399804 FUNDC2Q9BWH2 189 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 NECTIN3Q9NQS3 549 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 C14orf105Q9NVL8 296 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 CASC3O15234 703 aaKnown RBP13.19□□□□□ -0.3
SCAF4-202ENST00000399804 DCNP07585 359 aaKnown RBP13.19□□□□□ -0.3
SCAF4-202ENST00000399804 HEXBP07686 556 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 OR1D4P47884 311 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 PSMD7P51665 324 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 ANKRD34AQ69YU3 496 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 OR52R1Q8NGF1 315 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 SLC41A3Q96GZ6 507 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 TRIM2Q9C040 744 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 ABCB9Q9NP78 766 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 GPR52Q9Y2T5 361 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 CCL27Q9Y4X3 112 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 CACNA1CQ13936 2221 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 NINQ8N4C6 2090 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 GLULP15104 373 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 CRHBPP24387 322 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 TMBIM6P55061 237 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 MEDAGQ5VYS4 303 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 USP43Q70EL4 1123 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 CXXC5Q7LFL8 322 aaKnown RBP13.19□□□□□ -0.3
SCAF4-202ENST00000399804 TMEM151BQ8IW70 566 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 RIMKLAQ8IXN7 391 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 OR5T3Q8NGG3 340 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 OR51G2Q8NGK0 314 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 ELP4Q96EB1 424 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 JSRP1Q96MG2 331 aaPredicted RBP13.19□□□□□ -0.3
SCAF4-202ENST00000399804 MKL2Q9ULH7 1088 aa13.19□□□□□ -0.3
SCAF4-202ENST00000399804 FAM227AF5H4B4 570 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 SOX30O94993 753 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
SCAF4-202ENST00000399804 PIGAP37287 484 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 MAP4K2Q12851 820 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 SHISA6Q6ZSJ9 500 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 SPARTQ8N0X7 666 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 ARL14Q8N4G2 192 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 SLC16A11Q8NCK7 471 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 ADAMTS16Q8TE57 1224 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 CREB3L4Q8TEY5 395 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 MGLLQ99685 303 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 ZBTB20Q9HC78 741 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-202ENST00000399804 A0A1W2PPC4 97 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 TRAPPC13A5PLN9 417 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 OR5K3A6NET4 321 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms