RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 C10orf82Q8WW14 230 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 ITCHQ96J02 903 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 PHF12Q96QT6 1004 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 BARD1Q99728 777 aaKnown RBP16.28■□□□□ 0.2
CTNS-203ENST00000399306 GPATCH2Q9NW75 528 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 ANKRD10Q9NXR5 420 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 MAP10Q9P2G4 905 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 PCDHGB3Q9Y5G1 929 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 SNX8Q9Y5X2 465 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 PRRC2CQ9Y520 2896 aaKnown RBP16.28■□□□□ 0.2
CTNS-203ENST00000399306 DUXAA6NLW8 204 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 KLRC4-KLRK1H3BQV0 150 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SLC22A2O15244 555 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 HMGN2P05204 90 aaKnown RBP16.27■□□□□ 0.2
CTNS-203ENST00000399306 ABCB1P08183 1280 aaPredicted RBP16.27■□□□□ 0.2
CTNS-203ENST00000399306 EFNA1P20827 205 aaPredicted RBP16.27■□□□□ 0.2
CTNS-203ENST00000399306 KRT20P35900 424 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 PLCXD2Q0VAA5 305 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SNTA1Q13424 505 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SPDYE7PQ495Y7 208 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SLC22A10Q63ZE4 541 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SLC44A2Q8IWA5 706 aaPredicted RBP16.27■□□□□ 0.2
CTNS-203ENST00000399306 FBXW8Q8N3Y1 598 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 OR9I1Q8NGQ6 314 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 OMA1Q96E52 524 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SPDL1Q96EA4 605 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 MAGED4Q96JG8 741 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 PANX1Q96RD7 426 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 ACTRT3Q9BYD9 372 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 PIGUQ9H490 435 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SLC52A3Q9NQ40 469 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SERHLQ9NQF3 203 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 SACM1LQ9NTJ5 587 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 CBLCQ9ULV8 474 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 VPS4AQ9UN37 437 aa16.27■□□□□ 0.2
CTNS-203ENST00000399306 FAF1Q9UNN5 650 aaPredicted RBP16.27■□□□□ 0.2
CTNS-203ENST00000399306 CHCHD2Q9Y6H1 151 aaPredicted RBP16.27■□□□□ 0.2
CTNS-203ENST00000399306 RNF103-CHMP3A0A140T963 221 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 CCDC154A6NI56 674 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 RFXANKO14593 260 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 TSPAN2O60636 221 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 RASAL1O95294 804 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 AGR2O95994 175 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 F10P00742 488 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 CRYABP02511 175 aaKnown RBP16.26■□□□□ 0.19
CTNS-203ENST00000399306 P04436 131 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 ALOX5P09917 674 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 CNR1P21554 472 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 PIGAP37287 484 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 PRKAG1P54619 331 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 CORO7P57737 925 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 GNGT1P63211 74 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 TP53BP2Q13625 1128 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 DECR1Q16698 335 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 SAXO2Q658L1 398 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 MDGA2Q7Z553 956 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 SPATA21Q7Z572 469 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 ANKRD46Q86W74 232 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 SPPL2AQ8TCT8 520 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 RNF138Q8WVD3 245 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 NTNG2Q96CW9 530 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 NEURL3Q96EH8 262 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 COL21A1Q96P44 957 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 CCDC167Q9P0B6 97 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 OR10H1Q9Y4A9 318 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 GMEB1Q9Y692 573 aa16.26■□□□□ 0.19
CTNS-203ENST00000399306 A0A1W2PP18 115 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 ASNA1O43681 348 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 KCNH1O95259 989 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 CPSF4O95639 269 aaKnown RBP16.25■□□□□ 0.19
CTNS-203ENST00000399306 AK1P00568 194 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 GUSBP08236 651 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 DRD4P21917 467 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 SOAT1P35610 550 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 MAN2A2P49641 1150 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 GAB1Q13480 694 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 LASP1Q14847 261 aaKnown RBP16.25■□□□□ 0.19
CTNS-203ENST00000399306 TIGD2Q4W5G0 525 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 AGKQ53H12 422 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 C6orf120Q7Z4R8 191 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 GALNTL5Q7Z4T8 443 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 CPLX4Q7Z7G2 160 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 ZFP62Q8NB50 900 aaPredicted RBP16.25■□□□□ 0.19
CTNS-203ENST00000399306 FAM110BQ8TC76 370 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 GTF2H4Q92759 462 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 DIO2Q92813 273 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 HGDQ93099 445 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 TMBIM1Q969X1 311 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 TMCO6Q96DC7 493 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 FAM173AQ9BQD7 235 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 HHATLQ9HCP6 504 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 SAR1AQ9NR31 198 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 AGPAT4Q9NRZ5 378 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 CNOT11Q9UKZ1 510 aaKnown RBP16.25■□□□□ 0.19
CTNS-203ENST00000399306 EML6Q6ZMW3 1958 aa16.25■□□□□ 0.19
CTNS-203ENST00000399306 RP1L1Q8IWN7 2480 aaPredicted RBP16.25■□□□□ 0.19
CTNS-203ENST00000399306 TTLL8A6PVC2 850 aa16.24■□□□□ 0.19
CTNS-203ENST00000399306 C9JVG2 144 aa16.24■□□□□ 0.19
CTNS-203ENST00000399306 PEX1O43933 1283 aa16.24■□□□□ 0.19
CTNS-203ENST00000399306 SNX3O60493 162 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms