RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CDCP1Q9H5V8 836 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 NT5DC2Q9H857 520 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 HEXA-AS1Q9H8Q6 139 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 ZNF224Q9NZL3 707 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 CFAP97Q9P2B7 532 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 UBXN7O94888 489 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 DHFRP00374 187 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 NR2F1P10589 423 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 CCL5P13501 91 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 BTCP35070 178 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 BUD31P41223 144 aaPredicted RBP13.16□□□□□ -0.3
APOB-202ENST00000399256 SOX9P48436 509 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 DSG2Q14126 1118 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 NTRK2Q16620 822 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 VASNQ6EMK4 673 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 KIAA1211LQ6NV74 962 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 TMEM65Q6PI78 240 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 TBC1D19Q8N5T2 526 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 DBF4BQ8NFT6 615 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 RANBP3Q9H6Z4 567 aaPredicted RBP13.16□□□□□ -0.3
APOB-202ENST00000399256 SIRT3Q9NTG7 399 aaPredicted RBP13.16□□□□□ -0.3
APOB-202ENST00000399256 ASB4Q9Y574 426 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 LOC105369274A0A096LPK9 316 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 POP4O95707 220 aaKnown RBP13.15□□□□□ -0.3
APOB-202ENST00000399256 DDCP20711 480 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 ENTPD8Q5MY95 495 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 GDPD4Q6W3E5 623 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 IKBIPQ70UQ0 350 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 GPR135Q8IZ08 494 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 OR4N4Q8N0Y3 316 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 FIBINQ8TAL6 211 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 SMPDL3AQ92484 453 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 IL17FQ96PD4 163 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 SLC38A2Q96QD8 506 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 VN1R3Q9BXE9 311 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 OR51I1Q9H343 314 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 GHITMQ9H3K2 345 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 C11orf49Q9H6J7 331 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 PTGFRNQ9P2B2 879 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 LSM7Q9UK45 103 aaKnown RBP13.15□□□□□ -0.3
APOB-202ENST00000399256 AUP1Q9Y679 476 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 CACNG2Q9Y698 323 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 PRR23AA6NEV1 266 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 PLPP1O14494 284 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 EPPINO95925 133 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 ANXA3P12429 323 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 HLA-FP30511 346 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 ATP6V1E1P36543 226 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 DCDC1P59894 354 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 SLC30A6Q6NXT4 461 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
APOB-202ENST00000399256 SLC9B2Q86UD5 537 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 CDH24Q86UP0 819 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 SAMD12Q8N8I0 201 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 BBS1Q8NFJ9 593 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
APOB-202ENST00000399256 YIPF4Q9BSR8 244 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 SMG9Q9H0W8 520 aaKnown RBP13.15□□□□□ -0.3
APOB-202ENST00000399256 RNF208Q9H0X6 261 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 PLAGL1Q9UM63 463 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 POLHQ9Y253 713 aa13.15□□□□□ -0.3
APOB-202ENST00000399256 KDM4EB2RXH2 506 aaPredicted RBP13.15□□□□□ -0.31
APOB-202ENST00000399256 CKMP06732 381 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 CTSAP10619 480 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 CCT3P49368 545 aaKnown RBP13.15□□□□□ -0.31
APOB-202ENST00000399256 ZNF81P51508 661 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 SRP54P61011 504 aaKnown RBP13.15□□□□□ -0.31
APOB-202ENST00000399256 TAP2Q03519 686 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 TMEM115Q12893 351 aaPredicted RBP13.15□□□□□ -0.31
APOB-202ENST00000399256 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.31
APOB-202ENST00000399256 EOGTQ5NDL2 527 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 ZNF461Q8TAF7 563 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 CEP76Q8TAP6 659 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 HSD17B8Q92506 261 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 CHFRQ96EP1 664 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 WDR34Q96EX3 536 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 TRMT2BQ96GJ1 504 aaKnown RBP13.15□□□□□ -0.31
APOB-202ENST00000399256 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 FAM46AQ96IP4 442 aaKnown RBP13.15□□□□□ -0.31
APOB-202ENST00000399256 F2RL3Q96RI0 385 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 EMC7Q9NPA0 242 aa13.15□□□□□ -0.31
APOB-202ENST00000399256 FAM170BA6NMN3 283 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 FRS3O43559 492 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 ACP5P13686 325 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 VIPR1P32241 457 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 TALDO1P37837 337 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 PRLHRP49683 370 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 DBPQ10586 325 aaPredicted RBP13.14□□□□□ -0.31
APOB-202ENST00000399256 CCNJQ5T5M9 372 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 HENMT1Q5T8I9 393 aaKnown RBP13.14□□□□□ -0.31
APOB-202ENST00000399256 LUZP2Q86TE4 346 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 TRAM1L1Q8N609 369 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 ZNF366Q8N895 744 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 SCMH1Q96GD3 660 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 CPEB1Q9BZB8 566 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms