RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NR1D2Q14995 579 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 EXOSC6Q5RKV6 272 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RASSF6Q6ZTQ3 369 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PROKR2Q8NFJ6 384 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR13H1Q8NG92 308 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR7G2Q8NG99 324 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MGLLQ99685 303 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SLIRPQ9GZT3 109 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SAP130Q9H0E3 1048 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ZNF576Q9H609 170 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ARMC7Q9H6L4 198 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 HRASLS2Q9NWW9 162 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GALNT8Q9NY28 637 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CCDC59Q9P031 241 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 FBXL21Q9UKT6 434 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PCDHGA3Q9Y5H0 932 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CCRL2O00421 344 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ENTPD6O75354 484 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GPR75O95800 540 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TP53P04637 393 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 FUT4P22083 530 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 NR4A1P22736 598 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 STAT5AP42229 794 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 LIMK1P53667 647 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MLLT10P55197 1068 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 NCS1P62166 190 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SYT16Q17RD7 645 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RGS21Q2M5E4 152 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 LEXMQ3ZCV2 418 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TMCO5AQ8N6Q1 288 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CDRT4Q8N9R6 151 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR10G6Q8NH81 332 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 HMGB4Q8WW32 186 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ACOT11Q8WXI4 607 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DIO2Q92813 273 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 HSPBAP1Q96EW2 488 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 IL21RQ9HBE5 538 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 NLGN3Q9NZ94 848 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CHURC1-FNTBB4DL54 471 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 KPNA4O00629 521 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ALPPL2P10696 532 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 C1DQ13901 141 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF404Q494X3 552 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF628Q5EBL2 1059 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ARMC6Q6NXE6 501 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SYT13Q7L8C5 426 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TRIM73Q86UV7 250 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 IQCHQ86VS3 1027 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PIGXQ8TBF5 258 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TEX47Q8TBZ9 253 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 KAT2AQ92830 837 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC38A2Q96QD8 506 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 WFDC6Q9BQY6 131 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MND1Q9BWT6 205 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 NXF2Q9GZY0 626 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MED17Q9NVC6 651 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 WDR45Q9Y484 360 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 KCNE3Q9Y6H6 103 aa16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SNRNP200O75643 2136 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LRP4O75096 1905 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 A0A087WUU8 490 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 C2CD4DB7Z1M9 353 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TAF4O00268 1085 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 P2RX6O15547 441 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 GALR3O60755 368 aaPredicted RBP16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FMO6PO60774 539 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF217O75362 1048 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SULT1C4O75897 302 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PTHP01270 115 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SCG5P05408 212 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DBIP07108 87 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ALOX5P09917 674 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CTSEP14091 401 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TNNI3P19429 210 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CD40LGP29965 261 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TMED1Q13445 227 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 GINS1Q14691 196 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZSWIM7Q19AV6 140 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PUS10Q3MIT2 529 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FHL5Q5TD97 284 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC27A4Q6P1M0 643 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FRRS1Q6ZNA5 592 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 COMTD1Q86VU5 262 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CYP4Z2PQ8N1L4 340 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CLDN22Q8N7P3 220 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC16A11Q8NCK7 471 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OSTF1Q92882 214 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FCRL4Q96PJ5 515 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 IL4I1Q96RQ9 567 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CHRDQ9H2X0 955 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SEMA6CQ9H3T2 930 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 UCK1Q9HA47 277 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 C11orf16Q9NQ32 467 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 EQTNQ9NQ60 294 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC2A4RGQ9NR83 387 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 WSB2Q9NYS7 404 aaPredicted RBP16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SELENONQ9NZV5 590 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DIMT1Q9UNQ2 313 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MYO9BQ13459 2157 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms