RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ANKRD60Q9BZ19 345 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ROGDIQ9GZN7 287 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 PCDHAC1Q9H158 963 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MEAF6Q9HAF1 191 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SIRT7Q9NRC8 400 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 EXOGQ9Y2C4 368 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 PRG3Q9Y2Y8 225 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TCAF1Q9Y4C2 921 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SMIM28A0A1B0GU29 152 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TCRBV3S1A0A5B6 114 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 A6NIZ1 184 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CD8B2A6NJW9 211 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM233B4DJY2 109 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 F8WDY8 70 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 DLEU1O43261 78 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 HCRTO43612 131 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 HCN1O60741 890 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SAP30O75446 220 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 GLCEO94923 617 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 PPBPP02775 128 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 F7P08709 466 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 IMPDH1P20839 514 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MSR1P21757 451 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 IGFBP4P22692 258 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 IL12BP29460 328 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SRP9P49458 86 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TAS2R39P59534 338 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 PITX1P78337 314 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SEMG2Q02383 582 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CCDC85BQ15834 202 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 GUK1Q16774 197 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM214AQ32MH5 1076 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 KIAA0930Q6ICG6 404 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC16A13Q7RTY0 426 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CCDC117Q8IWD4 279 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 AQP12AQ8IXF9 295 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM58AQ8N1B3 248 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 RNF152Q8N8N0 203 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TXNDC5Q8NBS9 432 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM83FQ8NEG4 500 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SNAPC3Q92966 411 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TMBIM1Q969X1 311 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 DAZAP1Q96EP5 407 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 LRCH3Q96II8 777 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MEGF10Q96KG7 1140 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 PGLYRP2Q96PD5 576 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 COLEC11Q9BWP8 271 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 YTHDF1Q9BYJ9 559 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 LPAR2Q9HBW0 351 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SPHK1Q9NYA1 384 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 PLEK2Q9NYT0 353 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF224Q9NZL3 707 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SERGEFQ9UGK8 458 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ST3GAL5Q9UNP4 418 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 HES2Q9Y543 173 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 NUP205Q92621 2012 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 DHRS12A0PJE2 317 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SAC3D1A6NKF1 404 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MID1O15344 667 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CNMDO75829 334 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 GPIP06744 558 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ACSM4P0C7M7 580 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CSNK1EP49674 416 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 DAOAP59103 153 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 BFSP2Q13515 415 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SF1Q15637 639 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 C5orf64Q2M2E5 130 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 NDUFAF6Q330K2 333 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 AASDHQ4L235 1098 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF618Q5T7W0 954 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 LHX8Q68G74 356 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 C16orf62Q7Z3J2 963 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SPRED1Q7Z699 444 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SYVN1Q86TM6 617 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MYPOPQ86VE0 399 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 RBM45Q8IUH3 476 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TP53INP2Q8IXH6 220 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 STXBP6Q8NFX7 210 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 OR4K14Q8NGD5 310 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CELF6Q96J87 481 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 NECTIN4Q96NY8 510 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 FCRL5Q96RD9 977 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MRI1Q9BV20 369 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 TKTL2Q9H0I9 626 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MKKSQ9NPJ1 570 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 FBXO8Q9NRD0 319 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 COPZ2Q9P299 210 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 BAIAP2Q9UQB8 552 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 NME7Q9Y5B8 376 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 FRYLO94915 3013 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 C7orf72A4D263 438 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM72CH0Y354 149 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TRIM24O15164 1050 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TBX1O43435 398 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SIGLEC6O43699 453 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 WBP4O75554 376 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 EIF3GO75821 320 aaKnown RBP eCLIP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SUPT7LO94864 414 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 ELFN1P0C7U0 828 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 LHX1P48742 406 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms