RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 RPF2Q9H7B2 306 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 CUTCQ9NTM9 273 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 KCMF1Q9P0J7 381 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 VDAC3Q9Y277 283 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 GPR52Q9Y2T5 361 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 C20orf202A1L168 122 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 D6RAR5 112 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SLC22A5O76082 557 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 HOXA9P31269 272 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 RABL3Q5HYI8 236 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SLC27A4Q6P1M0 643 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 FAM198BQ6UWH4 519 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 CLEC17AQ6ZS10 378 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 TMEM150AQ86TG1 271 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 FAM46AQ96IP4 442 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 KREMEN1Q96MU8 473 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 TXNL4BQ9NX01 149 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 WDR37Q9Y2I8 494 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 PMM2O15305 246 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 MAGEB4O15481 346 aaPredicted RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 BEST1O76090 585 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SLC35A2P78381 396 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 GK2Q14410 553 aaPredicted RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 FGFBP1Q14512 234 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 FAM58AQ8N1B3 248 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 NELL2Q99435 816 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 VPS25Q9BRG1 176 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SLC2A6Q9UGQ3 507 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 TTC37Q6PGP7 1564 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 LGALS8O00214 317 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 PFKMP08237 780 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 MELKQ14680 651 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SHEQ5VZ18 495 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 TMEM173Q86WV6 379 aaPredicted RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 ACDQ96AP0 544 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SGTBQ96EQ0 304 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SORCS2Q96PQ0 1159 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 TGIF2Q9GZN2 237 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 GPR37L1O60883 481 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 GSTP1P09211 210 aaKnown RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 ITGB5P18084 799 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 MAKP20794 623 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 TGM4P49221 684 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 GSK3BP49841 420 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 CTXN1P60606 82 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 PRAMEF8Q5VWM4 474 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 PRAMEF7Q5VXH5 474 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 CELF5Q8N6W0 485 aaKnown RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 OR9A2Q8NGT5 310 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 OR52B2Q96RD2 323 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 CNN2Q99439 309 aaKnown RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 A0A1W2PS29 197 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 TSPAN11A1L157 253 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 HNRNPFP52597 415 aaKnown RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 HNRNPDQ14103 355 aaKnown RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 DEFB110Q30KQ9 67 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 SCCPDHQ8NBX0 429 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 DHRS9Q9BPW9 319 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SEMA4CQ9C0C4 833 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SLC38A1Q9H2H9 487 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 LRRC42Q9Y546 428 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 RIPK3Q9Y572 518 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 A0A1W2PP55 124 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 HOXB5P09067 269 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 KDELR2P33947 212 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 YIF1BQ5BJH7 314 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 PM20D2Q8IYS1 436 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 CD300AQ9UGN4 299 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 RABL2BQ9UNT1 228 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 DFNA5O60443 496 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 CFHP08603 1231 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 M6PRP20645 277 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SERPINA2P20848 420 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SERPINF1P36955 418 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 GPR143P51810 404 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 GDF10P55107 478 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 ZNF585AQ6P3V2 769 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 HS3ST5Q8IZT8 346 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 OR5AK2Q8NH90 309 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 PIGCQ92535 297 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 CNOT9Q92600 299 aaKnown RBP11.75□□□□□ -0.53
SMU1-201ENST00000397149 SGK3Q96BR1 496 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 SFXN2Q96NB2 322 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 ANKRD12Q6UB98 2062 aa11.75□□□□□ -0.53
SMU1-201ENST00000397149 FBXO24O75426 580 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 HLA-FP30511 346 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 LILRA4P59901 499 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 OLIG2Q13516 323 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 EXOSC6Q5RKV6 272 aaKnown RBP11.74□□□□□ -0.53
SMU1-201ENST00000397149 ASPGQ86U10 573 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 CD163Q86VB7 1156 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 ADGRF3Q8IZF5 1079 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 NLKQ9UBE8 527 aa11.74□□□□□ -0.53
SMU1-201ENST00000397149 MYOTQ9UBF9 498 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms