RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 RPS6KA2Q15349 733 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 CEBPEQ15744 281 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 ARHGAP11AQ6P4F7 1023 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 RPTNQ6XPR3 784 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 IKBIPQ70UQ0 350 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 DDIASQ8IXT1 998 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 FAM109AQ8N4B1 249 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 OR10G3Q8NGC4 313 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 OR52N2Q8NGI0 321 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 CDC26Q8NHZ8 85 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 HSPBAP1Q96EW2 488 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 FCRL1Q96LA6 429 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 C3orf30Q96M34 536 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 SECISBP2Q96T21 854 aaKnown RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 NUF2Q9BZD4 464 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 ZDHHC11Q9H8X9 412 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 ARMCX1Q9P291 453 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 SH3BGRL2Q9UJC5 107 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 BOKQ9UMX3 212 aaPredicted RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 POLR3HQ9Y535 204 aaPredicted RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 A0A0G2JMM0 328 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 A0A1B0GTH9 108 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 A0A1W2PPB8 328 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 A0A1W2PRS3 328 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 FAM166BA8MTA8 275 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 KIR3DP1A8MWS1 328 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 SDHDO14521 159 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 SLITRK5O94991 958 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 CBX7O95931 251 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 PCSK2P16519 638 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 PIGAP37287 484 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 PPICP45877 212 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 DNASE1L1P49184 302 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 ATP4BP51164 291 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 HSF1Q00613 529 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 FOXO1Q12778 655 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 KIAA0040Q15053 153 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 LTB4RQ15722 352 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 PDCD2Q16342 344 aaPredicted RBP13.39□□□□□ -0.27
SEC13-208ENST00000397109 SMU1Q2TAY7 513 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 TRMT12Q53H54 448 aaKnown RBP13.39□□□□□ -0.27
SEC13-208ENST00000397109 ZNF628Q5EBL2 1059 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 FAM180BQ6P0A1 224 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 TICAM1Q8IUC6 712 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 CHERPQ8IWX8 916 aaKnown RBP13.39□□□□□ -0.27
SEC13-208ENST00000397109 FAM9CQ8IZT9 166 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 OR52R1Q8NGF1 315 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 MCUR1Q96AQ8 359 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 LCORQ96JN0 433 aaPredicted RBP13.39□□□□□ -0.27
SEC13-208ENST00000397109 PPP3R2Q96LZ3 170 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 OR52B2Q96RD2 323 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 NXF5Q9H1B4 397 aaKnown RBP13.39□□□□□ -0.27
SEC13-208ENST00000397109 DEFB127Q9H1M4 99 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 ZNF385DQ9H6B1 395 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 NDE1Q9NXR1 346 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
SEC13-208ENST00000397109 TINAGQ9UJW2 476 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 CNOT11Q9UKZ1 510 aaKnown RBP13.39□□□□□ -0.27
SEC13-208ENST00000397109 TMED5Q9Y3A6 229 aa13.39□□□□□ -0.27
SEC13-208ENST00000397109 MYO1GB0I1T2 1018 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 PLOD3O60568 738 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 CLDN1O95832 211 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 DRD5P21918 477 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 ABCD3P28288 659 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 EPHA3P29320 983 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 NTSP30990 170 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 SOX18P35713 384 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 EMDP50402 254 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 PSPHP78330 225 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 KLF10Q13118 480 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 SLC10A1Q14973 349 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 MAPRE2Q15555 327 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 TMEM251Q8N6I4 163 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 OR5M3Q8NGP4 307 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 OR9A2Q8NGT5 310 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 FAM57AQ8TBR7 257 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 SPPL2AQ8TCT8 520 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 DIO2Q92813 273 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 CCDC120Q96HB5 630 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 DOHHQ9BU89 302 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 ITPAQ9BY32 194 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 CADM1Q9BY67 442 aaKnown RBP13.38□□□□□ -0.27
SEC13-208ENST00000397109 ZFP64Q9NPA5 681 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 TMEM45AQ9NWC5 275 aa13.38□□□□□ -0.27
SEC13-208ENST00000397109 ATP6AP2A0A1C7CYW4 349 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 E9PBE3 544 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 E9PLN8 166 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 UTP20O75691 2785 aaKnown RBP13.37□□□□□ -0.27
SEC13-208ENST00000397109 ATP6AP2O75787 350 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 PDE9AO76083 593 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 SNX4O95219 450 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 IGHG3P01860 377 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 SMSP52788 366 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 FBXW4P57775 412 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 MRPS35P82673 323 aaKnown RBP13.37□□□□□ -0.27
SEC13-208ENST00000397109 DUSP8Q13202 625 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 SNCBQ16143 134 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 ATP6AP1LQ52LC2 224 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms