RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ZNF675Q8TD23 568 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 LMX1AQ8TE12 382 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 GAB3Q8WWW8 586 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 GGHQ92820 318 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 UCK1Q9HA47 277 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 FAM60AQ9NP50 221 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 NDOR1Q9UHB4 597 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 CLCA2Q9UQC9 943 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 ZNF443Q9Y2A4 671 aaPredicted RBP13.99□□□□□ -0.17
CBX3-202ENST00000396386 WDR45Q9Y484 360 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 CEP192Q8TEP8 1941 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 KRBA1A5PL33 1030 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 LILRA5A6NI73 299 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 H3BN98 237 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 TPST2O60704 377 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 RDH16O75452 317 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 ZBTB11O95625 1053 aaPredicted RBP13.98□□□□□ -0.17
CBX3-202ENST00000396386 CAPZBP47756 277 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 ALDH6A1Q02252 535 aaKnown RBP13.98□□□□□ -0.17
CBX3-202ENST00000396386 FZD5Q13467 585 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 DUSP5Q16690 384 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 INAVAQ3KP66 663 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 C12orf73Q69YU5 71 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 CD300LDQ6UXZ3 194 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 P2RY8Q86VZ1 359 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 PEX5LQ8IYB4 626 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 STX19Q8N4C7 294 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 ARL14Q8N4G2 192 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 MORN4Q8NDC4 146 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 CADM4Q8NFZ8 388 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 DTNBP1Q96EV8 351 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 GUCD1Q96NT3 240 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 FOXQ1Q9C009 403 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 ADAP2Q9NPF8 381 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 CTPS2Q9NRF8 586 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 STARD5Q9NSY2 213 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 GPR83Q9NYM4 423 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 IFT52Q9Y366 437 aa13.98□□□□□ -0.17
CBX3-202ENST00000396386 SCN2AQ99250 2005 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 FAM170BA6NMN3 283 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SGK494L7N484 410 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 HCRTR1O43613 425 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 BCAS1O75363 584 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 LCKP06239 509 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 PROS1P07225 676 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 ALOX5P09917 674 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 CCNYL3P0C7X3 344 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 ZNF182P17025 639 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 IFNA8P32881 189 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SOX18P35713 384 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 RGS8P57771 180 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 SKP1P63208 163 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 RACK1P63244 317 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 COX10Q12887 443 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 AQP6Q13520 282 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SPCS2Q15005 226 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 TRAM2Q15035 370 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 CTF1Q16619 201 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 TRMT12Q53H54 448 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 EIPR1Q53HC9 387 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SIMC1Q8NDZ2 872 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SLC38A4Q969I6 547 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 PIGUQ9H490 435 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 ANKRD19PQ9H560 264 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 AMBNQ9NP70 447 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 MAT2BQ9NZL9 334 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 EFCAB10A6NFE3 127 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SLC9B1P1A6NJY1 282 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SLC22A1O15245 554 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 FRS3O43559 492 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 PLOD3O60568 738 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 FCMRO60667 390 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 MMP11P24347 488 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 AVPR1BP47901 424 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SNRPGP62308 76 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 COL9A2Q14055 689 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 LARS2Q15031 903 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 PUS10Q3MIT2 529 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 EXOSC6Q5RKV6 272 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 TYW3Q6IPR3 259 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 CASP12Q6UXS9 341 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 PLEKHM3Q6ZWE6 761 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 MCATQ8IVS2 390 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 ARHGEF39Q8N4T4 335 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 CDRT4Q8N9R6 151 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 OR9A4Q8NGU2 314 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 TBC1D15Q8TC07 691 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 DIO2Q92813 273 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 HLA-CQ95604 372 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SHDQ96IW2 340 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 ITPAQ9BY32 194 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 MTHFD2LQ9H903 347 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 CNOT2Q9NZN8 540 aaKnown RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 FBXL21Q9UKT6 434 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 MKLN1Q9UL63 735 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SLC6A14Q9UN76 642 aa13.97□□□□□ -0.17
CBX3-202ENST00000396386 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms