RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 DSCR3O14972 297 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 ARPC1BO15143 372 aaKnown RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 SCELO95171 688 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 GJB5O95377 273 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 HIST1H2AGP0C0S8 130 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 USP17L7P0C7H9 530 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 HIST1H2ADP20671 130 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SERPINF1P36955 418 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 AQP2P41181 271 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SLC1A2P43004 574 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 CRISP3P54108 245 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 ARF3P61204 181 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 SLC35A2P78381 396 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 ARF1P84077 181 aaKnown RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 HMGCS1Q01581 520 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SF3A2Q15428 464 aaKnown RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 GPR139Q6DWJ6 353 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 HIST2H2AA3Q6FI13 130 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 CCDC117Q8IWD4 279 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 MINDY1Q8N5J2 469 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 OR56A4Q8NGH8 313 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 FATE1Q969F0 183 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 CHFRQ96EP1 664 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 HIST1H2AHQ96KK5 128 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 HIST1H2AJQ99878 128 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 ULBP1Q9BZM6 244 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 OPN3Q9H1Y3 402 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 GPRC5BQ9NZH0 403 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 GPR160Q9UJ42 338 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 C13orf42A0A1B0GVH6 325 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 OR2A25A4D2G3 310 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 CACNB4O00305 520 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 F2P00734 622 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 GIMD1P0DJR0 217 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 IL9P15248 144 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 KCNE1P15382 129 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 CXCL3P19876 107 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 TUBG1P23258 451 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 RAB5CP51148 216 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 HTR4Q13639 388 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 PTRHD1Q6GMV3 140 aaKnown RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 RBFAQ8N0V3 343 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SYT14Q8NB59 555 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 INO80EQ8NBZ0 244 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 B3GNT7Q8NFL0 401 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 GGHQ92820 318 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 WNT8BQ93098 351 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 PYURFQ96I23 114 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 FCRL4Q96PJ5 515 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SEPT5Q99719 369 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 SMOQ99835 787 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 BHLHE41Q9C0J9 482 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 BRD9Q9H8M2 597 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SLC6A20Q9NP91 592 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SCP2D1Q9UJQ7 156 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 PCDHB8Q9UN66 801 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 NEU3Q9UQ49 428 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 PRUNE2Q8WUY3 3088 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 A0A087WZY1 265 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 A0A1B0GVI7 797 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 OR6C68A6NDL8 312 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 GABRDO14764 452 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 GPR37O15354 613 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 CRTAPO75718 401 aaPredicted RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 PRH1P02810 166 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 SMIM6P0DI80 62 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 CKBP12277 381 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 NR0B1P51843 470 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 PPP3R1P63098 170 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 AIMP2Q13155 320 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 PTGR1Q14914 329 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 KIAA1161Q6NSJ0 714 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TMIGD1Q6UXZ0 262 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 PIM3Q86V86 326 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 MFSD6LQ8IWD5 586 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 THEM5Q8N1Q8 247 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 BPIFCQ8NFQ6 507 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 WDR48Q8TAF3 677 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 HPSE2Q8WWQ2 592 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 YIPF6Q96EC8 236 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 NELL2Q99435 816 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 P2RY13Q9BPV8 354 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 PAAF1Q9BRP4 392 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 OR51M1Q9H341 326 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TCEAL2Q9H3H9 227 aaPredicted RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 BABAM2Q9NXR7 383 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 GALPQ9UBC7 116 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 FARSAQ9Y285 508 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 A0A087X1B8 175 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 MYBPHLA2RUH7 354 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 ZNF705FA8MVS1 300 aaPredicted RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 WASH3PC4AMC7 463 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TGOLN2O43493 480 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 EIF1BO60739 113 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 HCN1O60741 890 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 MT-CYBP00156 380 aaPredicted RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 SBK2P0C263 348 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 ZNF705DP0CH99 300 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms