RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 H2AFB2P0C5Z0 115 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 MTHFD2P13995 350 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 NCF1P14598 390 aaPredicted RBP8.55□□□□□ -1.04
RAE1-202ENST00000395840 CD1DP15813 335 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 NDUFV2P19404 249 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 COL9A1P20849 921 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 SLC6A1P30531 599 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 KCNJ3P48549 501 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 ATP12AP54707 1039 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 POLR2LP62875 67 aaKnown RBP8.55□□□□□ -1.04
RAE1-202ENST00000395840 GPR176Q14439 515 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 SLC14A2Q15849 920 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 MAPKAPK3Q16644 382 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 CD276Q5ZPR3 534 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 Q6ZVU0 165 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 VTCN1Q7Z7D3 282 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 LDB1Q86U70 411 aaPredicted RBP8.55□□□□□ -1.04
RAE1-202ENST00000395840 OR4N4Q8N0Y3 316 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 STK40Q8N2I9 435 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 LIX1Q8N485 282 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 CLDN22Q8N7P3 220 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 OR1M1Q8NGA1 313 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 GANCQ8TET4 914 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 SCMH1Q96GD3 660 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 HBEGFQ99075 208 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 MED18Q9BUE0 208 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 SARGQ9BW04 601 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 NKX6-2Q9C056 277 aaPredicted RBP8.55□□□□□ -1.04
RAE1-202ENST00000395840 POLR1EQ9GZS1 481 aaKnown RBP8.55□□□□□ -1.04
RAE1-202ENST00000395840 OR51J1Q9H342 316 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 ZDHHC4Q9NPG8 344 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 DLL4Q9NR61 685 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 USP36Q9P275 1121 aaKnown RBP8.55□□□□□ -1.04
RAE1-202ENST00000395840 PHF11Q9UIL8 331 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 SLC6A14Q9UN76 642 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 CKAP5Q14008 2032 aa8.55□□□□□ -1.04
RAE1-202ENST00000395840 C7orf66A4D0T2 115 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 EFCAB7A8K855 629 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 LILRB5O75023 590 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 RPP40O75818 363 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 MT-CYBP00156 380 aaPredicted RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 IL1AP01583 271 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 JCHAINP01591 159 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 CHRM5P08912 532 aaPredicted RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 GABRB1P18505 474 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 SERPINA4P29622 427 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 CAPZA1P52907 286 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 CAV3P56539 151 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 RIPPLY1Q0D2K3 151 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 C22orf42Q6IC83 251 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 KIAA1211LQ6NV74 962 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 Q6ZSR9 355 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 KDELC2Q7Z4H8 507 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 ZER1Q7Z7L7 766 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 MDGA1Q8NFP4 955 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 IPMKQ8NFU5 416 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 OR9Q1Q8NGQ5 310 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 OR2T35Q8NGX2 323 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 MOSPD2Q8NHP6 518 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 WDR20Q8TBZ3 569 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 EDARADDQ8WWZ3 215 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 MRPS24Q96EL2 167 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 MS4A3Q96HJ5 214 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 LOXL4Q96JB6 756 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 CMSS1Q9BQ75 279 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 PTDSS2Q9BVG9 487 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 PAPOLGQ9BWT3 736 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 HDAC8Q9BY41 377 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 ACTR6Q9GZN1 396 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 NUDT15Q9NV35 164 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 SH3BP4Q9P0V3 963 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 MIOXQ9UGB7 285 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 ZNF225Q9UK10 706 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 POMT2Q9UKY4 750 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 SAMD4AQ9UPU9 718 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 POLR3HQ9Y535 204 aaPredicted RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 RNF215Q9Y6U7 377 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 CUL9Q8IWT3 2517 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 SGK494L7N484 410 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 TO15178 435 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 PSMD3O43242 534 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 SMAD6O43541 496 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 SOCS5O75159 536 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 POP7O75817 140 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 CD160O95971 181 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 IFNA4P05014 189 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 S100A9P06702 114 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 UROSP10746 265 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 HOXB6P17509 224 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 SDC2P34741 201 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 P2RY2P41231 377 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 ALDH9A1P49189 494 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 FNTBP49356 437 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 MAZP56270 477 aaKnown RBP8.54□□□□□ -1.04
RAE1-202ENST00000395840 EXOC3L2Q2M3D2 409 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 PLA1AQ53H76 456 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 LIPKQ5VXJ0 399 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 SLC25A25Q6KCM7 469 aa8.54□□□□□ -1.04
RAE1-202ENST00000395840 ALKAL2Q6UX46 152 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms