RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 MAP3K8P41279 467 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 OR1E2P47887 323 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 KCNC4Q03721 635 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 NHSL2Q5HYW2 709 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 OTUD3Q5T2D3 398 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 ARHGAP40Q5TG30 622 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 C1orf189Q5VU69 101 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 SHQ1Q6PI26 577 aaKnown RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 QSOX2Q6ZRP7 698 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 TMEM179BQ7Z7N9 219 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 C7orf57Q8NEG2 295 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 OR52R1Q8NGF1 315 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 MAGEE2Q8TD90 523 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 APOBEC4Q8WW27 367 aaKnown RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 CDS1Q92903 461 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 ZNF578Q96N58 590 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 ZNF300Q96RE9 604 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 RSPO3Q9BXY4 272 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 DUSP22Q9NRW4 184 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 OCIAD1Q9NX40 245 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 SH3GLB1Q9Y371 365 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 DSPPQ9NZW4 1301 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 A0A1W2PNU3 283 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 RECKO95980 971 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 HPRP00739 348 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 ALDH3A2P51648 485 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 DUSP8Q13202 625 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 ARHGAP11BQ3KRB8 267 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 C6orf52Q5T4I8 152 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 SWT1Q5T5J6 900 aaKnown RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 OLIG3Q7RTU3 272 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 PROX1Q92786 737 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 PTCHD1Q96NR3 888 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 USE1Q9NZ43 259 aa22.86■■□□□ 1.25
CTF1-202ENST00000395019 IFT80Q9P2H3 777 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 MAGED1Q9Y5V3 778 aaPredicted RBP22.86■■□□□ 1.25
CTF1-202ENST00000395019 A8MVJ9 347 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 SOX30O94993 753 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 FPR1P21462 350 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 DNAJA1P31689 397 aaKnown RBP22.85■■□□□ 1.25
CTF1-202ENST00000395019 CHRNEQ04844 493 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 PUM1Q14671 1186 aaKnown RBP eCLIP22.85■■□□□ 1.25
CTF1-202ENST00000395019 CYP27C1Q4G0S4 372 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 CHDHQ8NE62 594 aaPredicted RBP22.85■■□□□ 1.25
CTF1-202ENST00000395019 RNF31Q96EP0 1072 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 NRBF2Q96F24 287 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 ZNF354BQ96LW1 612 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 SLC7A5P2Q9GIP4 190 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 REEP1Q9H902 201 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 MKKSQ9NPJ1 570 aaPredicted RBP22.85■■□□□ 1.25
CTF1-202ENST00000395019 SATB2Q9UPW6 733 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 PCDHGB3Q9Y5G1 929 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 ENPP4Q9Y6X5 453 aa22.85■■□□□ 1.25
CTF1-202ENST00000395019 KNTC1P50748 2209 aa22.84■■□□□ 1.25
CTF1-202ENST00000395019 ALPLP05186 524 aa22.84■■□□□ 1.25
CTF1-202ENST00000395019 PPP1R8Q12972 351 aaKnown RBP22.84■■□□□ 1.25
CTF1-202ENST00000395019 BPHLQ86WA6 291 aaPredicted RBP22.84■■□□□ 1.25
CTF1-202ENST00000395019 MARVELD2Q8N4S9 558 aa22.84■■□□□ 1.25
CTF1-202ENST00000395019 ADAMTS14Q8WXS8 1223 aa22.84■■□□□ 1.25
CTF1-202ENST00000395019 NR1H4Q96RI1 486 aaPredicted RBP22.84■■□□□ 1.25
CTF1-202ENST00000395019 OSBPL10Q9BXB5 764 aa22.84■■□□□ 1.25
CTF1-202ENST00000395019 AMBRA1Q9C0C7 1298 aa22.84■■□□□ 1.25
CTF1-202ENST00000395019 SMPD3Q9NY59 655 aaPredicted RBP22.84■■□□□ 1.25
CTF1-202ENST00000395019 SAMHD1Q9Y3Z3 626 aaKnown RBP22.84■■□□□ 1.25
CTF1-202ENST00000395019 U3KQV3 271 aa22.84■■□□□ 1.25
CTF1-202ENST00000395019 IGKV3D-11A0A0A0MRZ8 115 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 ADAMDEC1O15204 470 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 IFNW1P05000 195 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 CDK4P11802 303 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 CCL4P13236 92 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 SDHBP21912 280 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 ARHGDIAP52565 204 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 HPCAP84074 193 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 PPP2R2BQ00005 443 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 MLIPQ5VWP3 458 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 HS3ST5Q8IZT8 346 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 DEPDC7Q96QD5 511 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 EPYCQ99645 322 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 RBM4BQ9BQ04 359 aaKnown RBP22.83■■□□□ 1.25
CTF1-202ENST00000395019 LMF2Q9BU23 707 aaKnown RBP22.83■■□□□ 1.25
CTF1-202ENST00000395019 RBM4Q9BWF3 364 aaKnown RBP22.83■■□□□ 1.25
CTF1-202ENST00000395019 GABARAPL1Q9H0R8 117 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 SPTBN2O15020 2390 aa22.83■■□□□ 1.25
CTF1-202ENST00000395019 SCRG1O75711 98 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 DNAJB5O75953 348 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 NKX2-2O95096 273 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 TIAF1O95411 115 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 AK1P00568 194 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 IFNA16P05015 189 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 CSTF2P33240 577 aaKnown RBP eCLIP22.82■■□□□ 1.24
CTF1-202ENST00000395019 RHAGQ02094 409 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 FUT7Q11130 342 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 TARDBPQ13148 414 aaKnown RBP eCLIP22.82■■□□□ 1.24
CTF1-202ENST00000395019 ZNF267Q14586 743 aaPredicted RBP22.82■■□□□ 1.24
CTF1-202ENST00000395019 PWWP2BQ6NUJ5 590 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 FRRS1Q6ZNA5 592 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 BMPERQ8N8U9 685 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 TFAP2CQ92754 450 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 PMEPA1Q969W9 287 aa22.82■■□□□ 1.24
CTF1-202ENST00000395019 SDF2Q99470 211 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms