RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ERVPABLB-1P60509 514 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 MOGQ16653 247 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 PM20D1Q6GTS8 502 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 RBM12BQ8IXT5 1001 aaKnown RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 MAL2Q969L2 176 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM9Q9P0T7 183 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SH3BGRL2Q9UJC5 107 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TIMM8BQ9Y5J9 83 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SPO11Q9Y5K1 396 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 LOC102723532A0A0G2JNH3 316 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 OTOL1A6NHN0 477 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 CLCA1A8K7I4 914 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 ANKRD28O15084 1053 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 RAB11BQ15907 218 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 C1orf220Q5T0J3 134 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 DUS1LQ6P1R4 473 aaKnown RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 PLBD1Q6P4A8 553 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 HSD11B1LQ7Z5J1 315 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 ELMOD2Q8IZ81 293 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SHISA4Q96DD7 197 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 KLHL15Q96M94 604 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SOX17Q9H6I2 414 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 WDR37Q9Y2I8 494 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 NFS1Q9Y697 457 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 CCDC88AQ3V6T2 1871 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 NAV1Q8NEY1 1877 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 A0A0A6YYC8 382 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 I3L1I5 382 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 GCH1P30793 250 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 STK11Q15831 433 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 CTC1Q2NKJ3 1217 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 ENPP6Q6UWR7 440 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TEX26Q8N6G2 289 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 OR8J1Q8NGP2 316 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 HLA-CQ95604 372 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 L3HYPDHQ96EM0 354 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 LIN28AQ9H9Z2 209 aaKnown RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 CCM2LQ9NUG4 571 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 HEMK1Q9Y5R4 338 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 A0A0U1RQS6 177 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TMX2-CTNND1H3BSU7 103 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SNAPC5O75971 98 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 LAMP1P11279 417 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 IL4RP24394 825 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 CDK3Q00526 305 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 HNRNPA1L2Q32P51 320 aaKnown RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 PIGGQ5H8A4 983 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 FCRLBQ6BAA4 426 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 C3P1Q6ZMU1 363 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SCD5Q86SK9 330 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM173Q86WV6 379 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 FRS2Q8WU20 508 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 VDAC3Q9Y277 283 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SLC9B1P1A6NJY1 282 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 TRIM64CA6NLI5 447 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 NOTOA8MTQ0 251 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 E7ESA3 106 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 EIF3FO00303 357 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 KIAA0355O15063 1070 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ACTL6BO94805 426 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM225BP0DP42 221 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 PNMTP11086 282 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 RPS3P23396 243 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SH3BP2P78314 561 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF45Q02386 682 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 C6orf132Q5T0Z8 1188 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 NRMQ8IXM6 262 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 OR9K2Q8NGE7 335 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 HINT2Q9BX68 163 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SLC7A7Q9UM01 511 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 UBE2J1Q9Y385 318 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 COL2A1P02458 1487 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ISPDA4D126 451 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 MPPED1O15442 326 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SLC2A5P22732 501 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 MC3RP41968 323 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SLC6A8P48029 635 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 PNCKQ6P2M8 343 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 LCTLQ6UWM7 567 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 PIAS4Q8N2W9 510 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 OR52E1Q8NGJ3 308 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 GCDHQ92947 438 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 TCEAL4Q96EI5 215 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 UHRF1Q96T88 793 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ACTR6Q9GZN1 396 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 MMP27Q9H306 513 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 HEBP1Q9NRV9 189 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SLC39A1Q9NY26 324 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 LRRC37A3O60309 1634 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 PRSS38A1L453 326 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 LCATP04180 440 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 UCHL1P09936 223 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 GDF1P27539 372 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 NUDT1P36639 197 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 GMPRP36959 345 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 FNTBP49356 437 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 KIR2DS3Q14952 304 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms