RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 MAN2B1O00754 1011 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 MYL12BO14950 172 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 FCMRO60667 390 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 SLITRK5O94991 958 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 CSF2P04141 144 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3HP0C7X1 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TRIM23P36406 574 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 MC3RP41968 323 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 PSPHP78330 225 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 LARS2Q15031 903 aaKnown RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 RAB30Q15771 203 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 RSBN1Q5VWQ0 802 aaPredicted RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3GQ6DHY5 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3CQ6IPX1 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3Q8IZP1 549 aaPredicted RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 BBS1Q8NFJ9 593 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 OR9A2Q8NGT5 310 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 NELL2Q99435 816 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 BEX2Q9BXY8 128 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 PHPT1Q9NRX4 125 aaPredicted RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM74BQ9NUR3 256 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 RPL36Q9Y3U8 105 aaKnown RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 GON4LQ3T8J9 2241 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 CENPVL1A0A0U1RR11 272 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 HYKKA2RU49 373 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 DYRK3O43781 588 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 PIP5K1CO60331 668 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 AIFM1O95831 613 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 EGFP01133 1207 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 FUT1P19526 365 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 PSMA1P25786 263 aaKnown RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 PEBP1P30086 187 aaKnown RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 AVPR1BP47901 424 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TMPRSS11AQ6ZMR5 421 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 NKAIN4Q8IVV8 208 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM145Q8NBT3 493 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 OR4F15Q8NGB8 312 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 CAMK1GQ96NX5 476 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC17A9Q9BYT1 436 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 PLEKHB1Q9UF11 243 aaPredicted RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TESQ9UGI8 421 aaKnown RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 MKLN1Q9UL63 735 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 SCN2AQ99250 2005 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 MDC1Q14676 2089 aaKnown RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 TRBV23OR9-2A0A075B6M9 112 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A1W2PRQ8 180 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 RNGTTO60942 597 aaKnown RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 LGI1O95970 557 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 IL7P13232 177 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 NTSR1P30989 418 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 IGFALSP35858 605 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 RPS21P63220 83 aaKnown RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 ADAM15Q13444 863 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC30A8Q8IWU4 369 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 ACOT4Q8N9L9 421 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 IL17RCQ8NAC3 791 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 RNFT2Q96EX2 444 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 SAP130Q9H0E3 1048 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 NEK6Q9HC98 313 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 SEC14L4Q9UDX3 406 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 GPSM3Q9Y4H4 160 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 ASB4Q9Y574 426 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A075B6Q4 140 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 SHISA3A0PJX4 238 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 ZC3H12DA2A288 527 aaKnown RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 PDE9AO76083 593 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 KLF8O95600 359 aaPredicted RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 EML2O95834 649 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 THY1P04216 161 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 HOXB2P14652 356 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 GPR4P46093 362 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 RORCP51449 518 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 PPP2CBP62714 309 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 PPP2CAP67775 309 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 ALDH6A1Q02252 535 aaKnown RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 PRDX1Q06830 199 aaKnown RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM31Q5JXX7 168 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 AGAP6Q5VW22 663 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 OR4N5Q8IXE1 308 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 FAM26EQ8N5C1 309 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 PROKR2Q8NFJ6 384 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 MS4A6EQ96DS6 147 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 C1GALT1C1Q96EU7 318 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 AGAP4Q96P64 663 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 CTRCQ99895 268 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 C1QTNF2Q9BXJ5 285 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 SRRQ9GZT4 340 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 PRDM7Q9NQW5 492 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 APOBEC3BQ9UH17 382 aaKnown RBP12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 ENOPH1Q9UHY7 261 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 CA5BQ9Y2D0 317 aa12.65□□□□□ -0.38
GTF2F1-201ENST00000394456 HYAL3O43820 417 aaPredicted RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 RPN2P04844 631 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 CEACAM5P06731 702 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms