RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CALHM2Q9HA72 323 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MCCC2Q9HCC0 563 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 AKIP1Q9NQ31 210 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.29□□□□□ -1.88
XRN1-202ENST00000392981 FKBP14Q9NWM8 211 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 GHRLQ9UBU3 117 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 KCNS2Q9ULS6 477 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ZC3H13Q5T200 1668 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 CNTNAP5Q8WYK1 1306 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MAP3K5Q99683 1374 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 C17orf105B2RV13 164 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 H0YL77 283 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SH2D1BO14796 132 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SYT7O43581 403 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 AIREO43918 545 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CREG1O75629 220 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MMP10P09238 476 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CCDC166P0CW27 439 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 LAP3P28838 519 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TNFRSF4P43489 277 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 HTR6P50406 440 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CLDN17P56750 224 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MMRN1Q13201 1228 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PIGHQ14442 188 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 TRIM16LQ309B1 348 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SOHLH1Q5JUK2 328 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CDHR3Q6ZTQ4 885 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 HDDC2Q7Z4H3 204 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 DCXRQ7Z4W1 244 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SYT12Q8IV01 421 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CCDC36Q8IYA8 594 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TDHQ8IZJ6 230 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PCDH20Q8N6Y1 951 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 LRTM2Q8N967 370 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 EDAQ92838 391 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ZNF707Q96C28 371 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 SCRN2Q96FV2 425 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ZNF317Q96PQ6 595 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 IL4I1Q96RQ9 567 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 C1QTNF7Q9BXJ2 289 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 C1QTNF3Q9BXJ4 246 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 HES7Q9BYE0 225 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 UGT1A10Q9HAW8 530 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 FGFR1OP2Q9NVK5 253 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 C2orf42Q9NWW7 574 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RGS17Q9UGC6 210 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 FZD4Q9ULV1 537 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TMCO1Q9UM00 188 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RASD1Q9Y272 281 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CA5BQ9Y2D0 317 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ITSN2Q9NZM3 1697 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MAGI2Q86UL8 1455 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PREX2Q70Z35 1606 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ADCY9O60503 1353 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PLSCR5A0PG75 271 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SLC22A23A1A5C7 686 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MGAT4DA6NG13 374 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 A8MVM7 634 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TARM1B6A8C7 271 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 P2RY10O00398 339 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 GPR137BO60478 399 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 IGHV2-70P01814 119 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 VSIG8P0DPA2 414 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CNR2P34972 360 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CDKN1AP38936 164 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RPS6P62753 249 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 EGR4Q05215 589 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SPOCK1Q08629 439 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 GPR18Q14330 331 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ITPRIPL2Q3MIP1 535 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SYT14P1Q58G82 188 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 C8orf74Q6P047 294 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 BHLHB9Q6PI77 547 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RNF207Q6ZRF8 634 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MOB2Q70IA6 237 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RNF130Q86XS8 419 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 BOD1L2Q8IYS8 172 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MREGQ8N565 214 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SIDT2Q8NBJ9 832 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 MINDY2Q8NBR6 621 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RNF128Q8TEB7 428 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TNFRSF14Q92956 283 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MRPL24Q96A35 216 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 C18orf25Q96B23 403 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 LURAP1Q96LR2 239 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 AGO3Q9H9G7 860 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 NFE2L3Q9Y4A8 694 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ISPDA4D126 451 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 NOTOA8MTQ0 251 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PRAMEF26H0Y7S4 382 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 BLOC1S5-TXNDC5H3BN57 136 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 HRKO00198 91 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 EI24O14681 340 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RBMXL2O75526 392 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 MYO1DO94832 1006 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PSMG1O95456 288 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 EPOP01588 193 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RPS17P08708 135 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 ITPKBP27987 946 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 IFNA8P32881 189 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms