RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 TAF10Q12962 218 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 SLAQ13239 276 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 MESDQ14696 234 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 GANABQ14697 944 aaKnown RBP5.81□□□□□ -1.48
TRAV35-201ENST00000390462 OPCMLQ14982 345 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 CDSNQ15517 529 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 OR1C1Q15619 314 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF284Q2VY69 593 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 MLIPQ5VWP3 458 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 OR4F3Q6IEY1 312 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 SLC27A4Q6P1M0 643 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 FAM122CQ6P4D5 195 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 TMEM64Q6YI46 380 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF34Q8IZ26 560 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 PNLDC1Q8NA58 520 aaKnown RBP5.81□□□□□ -1.48
TRAV35-201ENST00000390462 SLC44A5Q8NCS7 719 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 NFAM1Q8NET5 270 aaPredicted RBP5.81□□□□□ -1.48
TRAV35-201ENST00000390462 MAGEC3Q8TD91 643 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 CD300LFQ8TDQ1 290 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 PDCD6IPQ8WUM4 868 aaKnown RBP5.81□□□□□ -1.48
TRAV35-201ENST00000390462 TCP11Q8WWU5 503 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 FAM3CQ92520 227 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 ELMO1Q92556 727 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 RAB1CQ92928 201 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 CIDECQ96AQ7 238 aaPredicted RBP5.81□□□□□ -1.48
TRAV35-201ENST00000390462 PHF21AQ96BD5 680 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 BPIFA2Q96DR5 249 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 TM4SF19Q96DZ7 209 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 AMDHD1Q96NU7 426 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 RIT2Q99578 217 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.81□□□□□ -1.48
TRAV35-201ENST00000390462 TECRQ9NZ01 308 aaKnown RBP5.81□□□□□ -1.48
TRAV35-201ENST00000390462 AHSPQ9NZD4 102 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 CD300AQ9UGN4 299 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 VANGL2Q9ULK5 521 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 KLHDC2Q9Y2U9 406 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 PCDHAC2Q9Y5I4 1007 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 UBR3Q6ZT12 1888 aa5.81□□□□□ -1.48
TRAV35-201ENST00000390462 LTN1O94822 1766 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 SH3TC1Q8TE82 1336 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PPIAL4EA0A075B759 164 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 A0A1W2PRB8 838 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 TUBAL3A6NHL2 446 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 IQCF5A8MTL0 148 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 HAS3O00219 553 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 TLX3O43711 291 aaPredicted RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 ITM2AO43736 263 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 STK17BO94768 372 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 FARP2O94887 1054 aaPredicted RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CST1P01037 141 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 GCP02774 474 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PPIAL4FP0DN26 164 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CTSAP10619 480 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CHRNB1P11230 501 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PRPS2P11908 318 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CCNB1P14635 433 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 GNLYP22749 145 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 RPL3P39023 403 aaKnown RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 MATKP42679 507 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 GPR4P46093 362 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CASP4P49662 377 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PITX1P78337 314 aaPredicted RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 MTX1Q13505 466 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 MEF2DQ14814 521 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 GGTA1PQ4G0N0 100 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 NDUFAF5Q5TEU4 345 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 LIPNQ5VXI9 398 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 OR7E24Q6IFN5 339 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 DPY19L2P2Q6ZN68 376 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 C17orf107Q6ZR85 190 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 SLC16A12Q6ZSM3 486 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 SSX9Q7RTT3 188 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 SPRED1Q7Z699 444 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 MRGPREQ86SM8 312 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 ZC3H3Q8IXZ2 948 aaKnown RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CDK20Q8IZL9 346 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 SPEM1Q8N4L4 309 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 ALLCQ8N6M5 410 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 KLHDC1Q8N7A1 406 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 LRTM2Q8N967 370 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 ADAD2Q8NCV1 583 aaKnown RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PIGTQ969N2 578 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 UHRF2Q96PU4 802 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 C19orf43Q9BQ61 176 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 SH2D3AQ9BRG2 576 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 TRAF4Q9BUZ4 470 aaPredicted RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 ST6GALNAC5Q9BVH7 336 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 TSSK1BQ9BXA7 367 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 IL22Q9GZX6 179 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 MTHFD2LQ9H903 347 aaPredicted RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 SEMA4GQ9NTN9 838 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 TMEM45AQ9NWC5 275 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 C1orf123Q9NWV4 160 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 STX18Q9P2W9 335 aaKnown RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 RNF6Q9Y252 685 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CSDC2Q9Y534 153 aaKnown RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PPIAL4AQ9Y536 164 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 CPSF1Q10570 1443 aaKnown RBP5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PPIP5K1Q6PFW1 1433 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 PDE4DIPQ5VU43 2346 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms