RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PPP4R4Q6NUP7 873 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 TMEM81Q6P7N7 255 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 STAC2Q6ZMT1 411 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 LRRC70Q7Z2Q7 622 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 ATG4DQ86TL0 474 aaPredicted RBP10.6□□□□□ -0.71
SOD1-202ENST00000389995 C17orf47Q8NEP4 570 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 OR7G1Q8NGA0 311 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 OR4K14Q8NGD5 310 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 GTPBP3Q969Y2 492 aaKnown RBP10.6□□□□□ -0.71
SOD1-202ENST00000389995 LCORQ96JN0 433 aaPredicted RBP10.6□□□□□ -0.71
SOD1-202ENST00000389995 CENPKQ9BS16 269 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 TRIM31Q9BZY9 425 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 DDX31Q9H8H2 851 aaKnown RBP10.6□□□□□ -0.71
SOD1-202ENST00000389995 ANKRA2Q9H9E1 313 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 RNF122Q9H9V4 155 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 SMYD2Q9NRG4 433 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 LIPT1Q9Y234 373 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 PLLPQ9Y342 182 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 MAGED1Q9Y5V3 778 aaPredicted RBP10.6□□□□□ -0.71
SOD1-202ENST00000389995 TEX264Q9Y6I9 313 aa10.6□□□□□ -0.71
SOD1-202ENST00000389995 CCDC188H7C350 402 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 UBXN8O00124 270 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 CLOCKO15516 846 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 REM1O75628 298 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 AQP8O94778 261 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 CPMP14384 443 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 PTNP21246 168 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 GRK2P25098 689 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 SERPINB1P30740 379 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 FEN1P39748 380 aaKnown RBP10.59□□□□□ -0.71
SOD1-202ENST00000389995 MORF4L2Q15014 288 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 LTB4RQ15722 352 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 PRICKLE4Q2TBC4 344 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 CTU2Q2VPK5 515 aaKnown RBP10.59□□□□□ -0.71
SOD1-202ENST00000389995 C6orf52Q5T4I8 152 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 C6orf163Q5TEZ5 329 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 PDIK1LQ8N165 341 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 TEX9Q8N6V9 391 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 OR52R1Q8NGF1 315 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 CAVIN3Q969G5 261 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 REPS1Q96D71 796 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
SOD1-202ENST00000389995 COL21A1Q96P44 957 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 ADOQ96SZ5 270 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 MCMBPQ9BTE3 642 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 NTMT1Q9BV86 223 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 RHOJQ9H4E5 214 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 ALG9Q9H6U8 611 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 POPDC3Q9HBV1 291 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 MAT2BQ9NZL9 334 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 OPTCQ9UBM4 332 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 RNF14Q9UBS8 474 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 ZNF337Q9Y3M9 751 aa10.59□□□□□ -0.71
SOD1-202ENST00000389995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.59□□□□□ -0.71
SOD1-202ENST00000389995 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 CXorf49A8MYA2 514 aaPredicted RBP10.58□□□□□ -0.72
SOD1-202ENST00000389995 SUPT3HB4E1H0 165 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 H3BML4 177 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 K7EPI3 171 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 SUPT3HO75486 399 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 CBX7O95931 251 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 DANCRP0C864 163 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 PEPDP12955 493 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 PORP16435 677 aaPredicted RBP10.58□□□□□ -0.72
SOD1-202ENST00000389995 PTX3P26022 381 aaPredicted RBP10.58□□□□□ -0.72
SOD1-202ENST00000389995 CASQ1P31415 396 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 PIK3CBP42338 1070 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 SLC6A8P48029 635 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 MRPS35P82673 323 aaKnown RBP10.58□□□□□ -0.72
SOD1-202ENST00000389995 ZNF844Q08AG5 666 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 DLG1Q12959 904 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 GUSBP1Q15486 140 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 TSC22D1Q15714 1073 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 BCL2A1Q16548 175 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 CPSF6Q16630 551 aaKnown RBP eCLIP10.58□□□□□ -0.72
SOD1-202ENST00000389995 TRMT12Q53H54 448 aaKnown RBP10.58□□□□□ -0.72
SOD1-202ENST00000389995 CDKL4Q5MAI5 379 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 RAET1LQ5VY80 246 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 DNM1P46Q6ZS02 220 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 IL17RELQ6ZVW7 336 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 NUDT13Q86X67 352 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 C17orf53Q8N3J3 647 aaPredicted RBP10.58□□□□□ -0.72
SOD1-202ENST00000389995 ARIH2OSQ8N7S6 290 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 ACTR6Q9GZN1 396 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 DSN1Q9H410 356 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 FOLH1BQ9HBA9 442 aa10.58□□□□□ -0.72
SOD1-202ENST00000389995 PKD1L1Q8TDX9 2849 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 SHISA8B8ZZ34 492 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 SCO2O43819 266 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 SSX4O60224 188 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 TMCC2O75069 709 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 TNFRSF21O75509 655 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 ERAL1O75616 437 aaKnown RBP10.57□□□□□ -0.72
SOD1-202ENST00000389995 SEC31AO94979 1220 aaKnown RBP10.57□□□□□ -0.72
SOD1-202ENST00000389995 NTN1O95631 604 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 KLK1P06870 262 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 PCSK2P16519 638 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 HK1P19367 917 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 IVDP26440 423 aa10.57□□□□□ -0.72
SOD1-202ENST00000389995 EMDP50402 254 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms