RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 Q8N377 158 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 OR10T2Q8NGX3 314 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 OR4Q3Q8NH05 313 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 RASL10AQ92737 203 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 RAB3CQ96E17 227 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 TSGA13Q96PP4 275 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 TRIM9Q9C026 710 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 AMBNQ9NP70 447 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 RDH8Q9NYR8 311 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 RAI14Q9P0K7 980 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 KLF2Q9Y5W3 355 aaPredicted RBP4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 CUX2O14529 1486 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 IGHV3-16A0A0C4DH30 117 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 A0A1B0GUL7 405 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 RNF222A6NCQ9 220 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 FBLL1A6NHQ2 334 aaKnown RBP4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 RPL37AP8A6NKH3 93 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 H0YL77 283 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 PDLIM1O00151 329 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 LRRTM2O43300 516 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 LANCL1O43813 399 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 SDC3O75056 442 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 CSF2P04141 144 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 PCCBP05166 539 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 HCKP08631 526 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 KRT13P13646 458 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 ETV5P41161 510 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 PGFP49763 221 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 ARHGDIAP52565 204 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 HAND2P61296 217 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 NUCB2P80303 420 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 CRMP1Q14194 572 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 GLIPR1L2Q4G1C9 344 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 SCYL2Q6P3W7 929 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 NIPAL3Q6P499 406 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 CEACAM19Q7Z692 300 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 SLC25A42Q86VD7 318 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 CBWD2Q8IUF1 395 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 HSCBQ8IWL3 235 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 ARL6IP6Q8N6S5 226 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 CCDC28BQ9BUN5 200 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 NFKBIZQ9BYH8 718 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 ADNPQ9H2P0 1102 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 TMOD2Q9NZR1 351 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 LAMP5Q9UJQ1 280 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 GRIN2DO15399 1336 aa4.37□□□□□ -1.71
RNU6-40P-201ENST00000384254 OR4F21O95013 312 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 EPB41P11171 864 aaKnown RBP4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 RPL34P49207 117 aaKnown RBP4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 VEGFCP49767 419 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 EMDP50402 254 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 METAP1P53582 386 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 HSD17B7P56937 341 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 RAB35Q15286 201 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 FCN2Q15485 313 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 PCK2Q16822 640 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 DCAF4L1Q3SXM0 396 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 SLX4IPQ5VYV7 408 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 FAM219BQ5XKK7 198 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 SULT1C3Q6IMI6 304 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 PNCKQ6P2M8 343 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 ADAMTSL5Q6ZMM2 481 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 GPRIN3Q6ZVF9 776 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 FADS6Q8N9I5 356 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 STKLD1Q8NE28 680 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 TOMM40LQ969M1 308 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 AATFQ9NY61 560 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 CGNQ9P2M7 1197 aaKnown RBP4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 MBD2Q9UBB5 411 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 AP4B1Q9Y6B7 739 aa4.36□□□□□ -1.71
RNU6-40P-201ENST00000384254 TRBV7-9A0A0J9YWB2 115 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 A0A1B0GWJ7 208 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 ACOD1A6NK06 481 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 LRRC30A6NM36 301 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF487B1APH4 448 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 CASKO14936 926 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 ANGPT2O15123 496 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 TYROBPO43914 113 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 SH3BGRLO75368 114 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 TOXO94900 526 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 IGHV3-13P01766 116 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 SERPINB2P05120 415 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 HOXB7P09629 217 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 HSPA5P11021 654 aaKnown RBP4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 H2AFXP16104 143 aaPredicted RBP4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 PSMA2P25787 234 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 HTR2AP28223 471 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 PRPHP41219 470 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 STK19P49842 368 aaPredicted RBP4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF85Q03923 595 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 ABRAXAS2Q15018 415 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 CCL14Q16627 93 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 CCDC57Q2TAC2 916 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 CYBRD1Q53TN4 286 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 RFWD3Q6PCD5 774 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 LRRC70Q7Z2Q7 622 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 TIPARPQ7Z3E1 657 aaKnown RBP4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 SLC47A2Q86VL8 602 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms