RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 ACP2P11117 423 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 POU2F1P14859 743 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 GABRA4P48169 554 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 IDH2P48735 452 aaKnown RBP17.98■□□□□ 0.47
GMDS-201ENST00000380805 CDC42P60953 191 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 COX10Q12887 443 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 DUSP5Q16690 384 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 SLC16A12Q6ZSM3 486 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 MCATQ8IVS2 390 aaKnown RBP17.98■□□□□ 0.47
GMDS-201ENST00000380805 LMX1AQ8TE12 382 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 RORBQ92753 470 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 CDS1Q92903 461 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 COL26A1Q96A83 441 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 ANKRD9Q96BM1 317 aaPredicted RBP17.98■□□□□ 0.47
GMDS-201ENST00000380805 TCTN2Q96GX1 697 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 STACQ99469 402 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 FNDC11Q9BVV2 318 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 RAB33BQ9H082 229 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 QRSL1Q9H0R6 528 aaKnown RBP17.98■□□□□ 0.47
GMDS-201ENST00000380805 MTHFD2LQ9H903 347 aaPredicted RBP17.98■□□□□ 0.47
GMDS-201ENST00000380805 ANKHQ9HCJ1 492 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 ACOT13Q9NPJ3 140 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 DUSP22Q9NRW4 184 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 MAT2BQ9NZL9 334 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 ENPP5Q9UJA9 477 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 IFT52Q9Y366 437 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 BLACEA4D250 179 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 SH3D21A4FU49 640 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 CLCA1A8K7I4 914 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 LMO7DNF2Z398 122 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 OR10H3O60404 316 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 SLC34A2O95436 690 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 PROS1P07225 676 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 HPCAP84074 193 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 UBE2UQ5VVX9 321 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 SLX4IPQ5VYV7 408 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 TYW3Q6IPR3 259 aaKnown RBP17.98■□□□□ 0.47
GMDS-201ENST00000380805 C1orf94Q6P1W5 598 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 PODNL1Q6PEZ8 512 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 TMEFF1Q8IYR6 380 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 FUNDC2Q9BWH2 189 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 ZNF350Q9GZX5 532 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 SAP130Q9H0E3 1048 aa17.98■□□□□ 0.47
GMDS-201ENST00000380805 TMEM221A6NGB7 291 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 SLC9B1P1A6NJY1 282 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 M0R296 226 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 FCMRO60667 390 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 LDB3O75112 727 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 TP53P04637 393 aaPredicted RBP17.97■□□□□ 0.47
GMDS-201ENST00000380805 THBS1P07996 1170 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 CCNA2P20248 432 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 RPS4Y1P22090 263 aaKnown RBP17.97■□□□□ 0.47
GMDS-201ENST00000380805 HNRNPKP61978 463 aaKnown RBP eCLIP17.97■□□□□ 0.478e-7■■■□□ 16.6
GMDS-201ENST00000380805 SKP1P63208 163 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 RPL6Q02878 288 aaKnown RBP17.97■□□□□ 0.47
GMDS-201ENST00000380805 INAVAQ3KP66 663 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 TRMT12Q53H54 448 aaKnown RBP17.97■□□□□ 0.47
GMDS-201ENST00000380805 C12orf73Q69YU5 71 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 SLC36A4Q6YBV0 504 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 VRK2Q86Y07 508 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 DEFB119Q8N690 84 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 CDRT4Q8N9R6 151 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 SIMC1Q8NDZ2 872 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 OR52P1PQ8NH57 321 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 FCGR1BQ92637 280 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 DIO2Q92813 273 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 PMM1Q92871 262 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 ZG16BQ96DA0 208 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 IMPAD1Q9NX62 359 aa17.97■□□□□ 0.47
GMDS-201ENST00000380805 SGK494L7N484 410 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 AQP9O43315 295 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 RDH16O75452 317 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 GABARAPO95166 117 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 DCNP07585 359 aaKnown RBP17.96■□□□□ 0.47
GMDS-201ENST00000380805 SLC35E2P0CK97 266 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 SNRPGP62308 76 aaKnown RBP17.96■□□□□ 0.47
GMDS-201ENST00000380805 NFATC3Q12968 1075 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 DUSP8Q13202 625 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 TBCEQ15813 527 aaPredicted RBP17.96■□□□□ 0.47
GMDS-201ENST00000380805 TMEM201Q5SNT2 666 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 AHSA2Q719I0 299 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 SHISA5Q8N114 240 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 OR4K5Q8NGD3 323 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 ADAMTS18Q8TE60 1221 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 DNASE2BQ8WZ79 361 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 MYDGFQ969H8 173 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 YIPF6Q96EC8 236 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 SDF2Q99470 211 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 COPS4Q9BT78 406 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 ENAMQ9NRM1 1142 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 STARD5Q9NSY2 213 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 KLHL28Q9NXS3 571 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 EPHA6Q9UF33 1036 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 ZNF443Q9Y2A4 671 aaPredicted RBP17.96■□□□□ 0.47
GMDS-201ENST00000380805 SIT1Q9Y3P8 196 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 WDR45Q9Y484 360 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 SCN2AQ99250 2005 aa17.96■□□□□ 0.47
GMDS-201ENST00000380805 A0A1W2PPW3 197 aa17.95■□□□□ 0.46
GMDS-201ENST00000380805 TPST2O60704 377 aa17.95■□□□□ 0.46
GMDS-201ENST00000380805 NME6O75414 186 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms