RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 NCCRP1Q6ZVX7 275 aaPredicted RBP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 TMEM173Q86WV6 379 aaPredicted RBP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 PLXDC1Q8IUK5 500 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 PIANPQ8IYJ0 282 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 GDPD1Q8N9F7 314 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 ANKK1Q8NFD2 765 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 ABHD11Q8NFV4 315 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 OR13C3Q8NGS6 347 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 C7orf34Q96L11 122 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 MS4A4EQ96PG1 132 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 SLC29A1Q99808 456 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 RIMS3Q9UJD0 308 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 RNASET2O00584 256 aaKnown RBP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 SDC1P18827 310 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 FGL1Q08830 312 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 CDRT4Q8N9R6 151 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 SCGB1C1Q8TD33 95 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 OR2S2Q9NQN1 319 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 SLC39A1Q9NY26 324 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 MYH11P35749 1972 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 TRIM64A6NGJ6 449 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 PRAMEF2O60811 474 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 NDUFB2O95178 105 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 GGT2P36268 569 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 ACTBP60709 375 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 ACTG1P63261 375 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 GALK2Q01415 458 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 RAB11BQ15907 218 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 CLLU1OSQ5K130 101 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 LEG1Q6P5S2 330 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 BEST3Q8N1M1 668 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 SLC25A44Q96H78 314 aaPredicted RBP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 CCDC86Q9H6F5 360 aaKnown RBP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 DCAF13Q9NV06 445 aaKnown RBP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 VAPAQ9P0L0 249 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 ACTL7AQ9Y615 435 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 ANTXRLA6NF34 631 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 DRGXA6NNA5 263 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 ARNTLO00327 626 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 NSDHLQ15738 373 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 RAET1LQ5VY80 246 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 SLC22A10Q63ZE4 541 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 PNPLA1Q8N8W4 532 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 OR5AR1Q8NGP9 310 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 FOXJ1Q92949 421 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 METTL2AQ96IZ6 378 aaKnown RBP15.22■□□□□ 0.03
COL2A1-202ENST00000380518 PITX2Q99697 317 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 SLC30A3Q99726 388 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 C5AR2Q9P296 337 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 NLKQ9UBE8 527 aa15.22■□□□□ 0.03
COL2A1-202ENST00000380518 HRGP04196 525 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 MAS1P04201 325 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 ZNF35P13682 527 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 IL4RP24394 825 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 HTR2AP28223 471 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 WNT4P56705 351 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 CTXN1P60606 82 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 NKX3-2P78367 333 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 HAGHLQ6PII5 290 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 USP53Q70EK8 1073 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 SERPINA11Q86U17 422 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 ADGRG5Q8IZF4 528 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 IQCF1Q8N6M8 205 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 CHDHQ8NE62 594 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 OR9Q2Q8NGE9 314 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 TMEM168Q9H0V1 697 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 C8orf33Q9H7E9 229 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 MEPEQ9NQ76 525 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 TREX1Q9NSU2 369 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 RNF186Q9NXI6 227 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 HIF3AQ9Y2N7 669 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 DNMT3AQ9Y6K1 912 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 CD40LGP29965 261 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 CCDC58Q4VC31 144 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 SLC15A4Q8N697 577 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 GPR26Q8NDV2 337 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 ACVR1CQ8NER5 493 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 NECTIN4Q96NY8 510 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 LPAR4Q99677 370 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 ARNT2Q9HBZ2 717 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 RARRES3Q9UL19 164 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 LCKP06239 509 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 PIN1Q13526 163 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 ZC3H14Q6PJT7 736 aaKnown RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 GPN2Q9H9Y4 310 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 CPNE5Q9HCH3 593 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 KLHL42Q9P2K6 505 aa15.21■□□□□ 0.03
COL2A1-202ENST00000380518 XRN1Q8IZH2 1706 aaKnown RBP15.21■□□□□ 0.03
COL2A1-202ENST00000380518 IFNA2P01563 188 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 DDCP20711 480 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 UQCRC1P31930 480 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 CCINQ13939 588 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 LCTLQ6UWM7 567 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 ARHGAP12Q8IWW6 846 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 SYT14Q8NB59 555 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 SAMD8Q96LT4 415 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 SERINC2Q96SA4 455 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 NTMT1Q9BV86 223 aa15.21■□□□□ 0.02
COL2A1-202ENST00000380518 SCML1Q9UN30 329 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms