RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SPCS2Q15005 226 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 ELOCQ15369 112 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 EIPR1Q53HC9 387 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 SLC25A30Q5SVS4 291 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 FHL5Q5TD97 284 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 DGLUCYQ7Z3D6 616 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 PEX5LQ8IYB4 626 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 GNPDA2Q8TDQ7 276 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 STACQ99469 402 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 PALMDQ9NP74 551 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 H3BN98 237 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 SRPX2O60687 465 aaPredicted RBP21.62■■□□□ 1.05
VPS16-201ENST00000380443 CNOT3O75175 753 aaKnown RBP21.62■■□□□ 1.05
VPS16-201ENST00000380443 CYP7B1O75881 506 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 THBS1P07996 1170 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 CELA2BP08218 269 aaPredicted RBP21.62■■□□□ 1.05
VPS16-201ENST00000380443 INHBBP09529 407 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 PVRP15151 417 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 ALDH4A1P30038 563 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 SERPINB10P48595 397 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 RAB38P57729 211 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 ZXDAP98168 799 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 LARS2Q15031 903 aaKnown RBP21.62■■□□□ 1.05
VPS16-201ENST00000380443 OCLNQ16625 522 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 ZNF542PQ5EBM4 170 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 AP1ARQ63HQ0 302 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 FAM111BQ6SJ93 734 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 CA13Q8N1Q1 262 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 CDRT4Q8N9R6 151 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 LRRC61Q9BV99 259 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.62■■□□□ 1.05
VPS16-201ENST00000380443 DUSP22Q9NRW4 184 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 GOLGA4Q13439 2230 aaKnown RBP21.61■■□□□ 1.05
VPS16-201ENST00000380443 NCOR1O75376 2440 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 NINQ8N4C6 2090 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 FAM227AF5H4B4 570 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 TMX2-CTNND1H3BSU7 103 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 M0R3G1 203 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 CSF2P04141 144 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 CD36P16671 472 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 SLC15A1P46059 708 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 FASLGP48023 281 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 ENTPD1P49961 510 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 DUSP8Q13202 625 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 DGUOKQ16854 277 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.61■■□□□ 1.05
VPS16-201ENST00000380443 TMEM236Q5W0B7 351 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 FRRS1Q6ZNA5 592 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 ZNF367Q7RTV3 350 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 ZER1Q7Z7L7 766 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 GKN2Q86XP6 184 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 SLC16A11Q8NCK7 471 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 B3GNT7Q8NFL0 401 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 EDAQ92838 391 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 SLC6A18Q96N87 628 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 KLHL25Q9H0H3 589 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 RACGAP1Q9H0H5 632 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 SLC25A19Q9HC21 320 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 GPR83Q9NYM4 423 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 WDR45Q9Y484 360 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 BDP1A6H8Y1 2624 aa21.61■■□□□ 1.05
VPS16-201ENST00000380443 TTC28Q96AY4 2481 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 AP3D1O14617 1153 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 LCKP06239 509 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 ALOX5P09917 674 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 CCNYL3P0C7X3 344 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 C21orf33P30042 268 aaPredicted RBP21.6■■□□□ 1.05
VPS16-201ENST00000380443 SDR16C5Q8N3Y7 309 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 CADM4Q8NFZ8 388 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 ANKHQ9HCJ1 492 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 POLE3Q9NRF9 147 aa21.6■■□□□ 1.05
VPS16-201ENST00000380443 METTL12A8MUP2 240 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 OR5F1O95221 314 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 STSP08842 583 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 NME1P15531 152 aaKnown RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 MMP11P24347 488 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 TGFBR2P37173 567 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 PDX1P52945 283 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 VSX2P58304 361 aaPredicted RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 SNRPNP63162 240 aaKnown RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 OCA2Q04671 838 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 TIGD6Q17RP2 521 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 RNLSQ5VYX0 342 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 PLAG1Q6DJT9 500 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 OLIG3Q7RTU3 272 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 VRK2Q86Y07 508 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 SLC9A6Q92581 669 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 DIO2Q92813 273 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 CDS1Q92903 461 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 VMP1Q96GC9 406 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 POLDIP3Q9BY77 421 aaKnown RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 SAP130Q9H0E3 1048 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 ZNF443Q9Y2A4 671 aaPredicted RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 MRPS2Q9Y399 296 aaKnown RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 RPL36Q9Y3U8 105 aaKnown RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 LILRA5A6NI73 299 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 MAN1A2O60476 641 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 TP53P04637 393 aaPredicted RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 NUDT6P53370 316 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 TUBA1BP68363 451 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms