RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CHRNB1P11230 501 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 CPMP14384 443 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 POU2F1P14859 743 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF182P17025 639 aaPredicted RBP9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 TGM1P22735 817 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 SERPINB10P48595 397 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 OLR1P78380 273 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 SEC23BQ15437 767 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 TCEA2Q15560 299 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF829Q3KNS6 432 aaPredicted RBP9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 MEDAGQ5VYS4 303 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 C12orf73Q69YU5 71 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 KLHL35Q6PF15 583 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 CASP12Q6UXS9 341 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 PTCHD4Q6ZW05 846 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 RBM45Q8IUH3 476 aaKnown RBP9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 LACC1Q8IV20 430 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 TOR1AIP2Q8NFQ8 470 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 TSTD1Q8NFU3 115 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 TANKQ92844 425 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC38A4Q969I6 547 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 UBE2FQ969M7 185 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 C16orf58Q96GQ5 468 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 GPR174Q9BXC1 333 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 RSPO3Q9BXY4 272 aaPredicted RBP9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 POLR2J2Q9GZM3 115 aaKnown RBP9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 RACGAP1Q9H0H5 632 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 PCED1AQ9H1Q7 454 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 CHRDQ9H2X0 955 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 EVA1AQ9H8M9 152 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 UCK1Q9HA47 277 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 PARD6AQ9NPB6 346 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 C19orf53Q9UNZ5 99 aaPredicted RBP9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 SIT1Q9Y3P8 196 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 BLACEA4D250 179 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 GALR3O60755 368 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CNOT3O75175 753 aaKnown RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 EPPINO95925 133 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 AK1P00568 194 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ATP1B1P05026 303 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CNR2P34972 360 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 GSSP48637 474 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 EMP3P54852 163 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 RAB38P57729 211 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SKP1P63208 163 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 HHEXQ03014 270 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ST3GAL3Q11203 375 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 TARDBPQ13148 414 aaKnown RBP eCLIP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 AQP6Q13520 282 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 PIN1Q13526 163 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 IRF3Q14653 427 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SPCS2Q15005 226 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 TRAM2Q15035 370 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 DGUOKQ16854 277 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ARHGAP11BQ3KRB8 267 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 EIPR1Q53HC9 387 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 C1orf94Q6P1W5 598 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 PODNL1Q6PEZ8 512 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF367Q7RTV3 350 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OR7G2Q8NG99 324 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OR6T1Q8NGN1 323 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OR8J1Q8NGP2 316 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC7A13Q8TCU3 470 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF675Q8TD23 568 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ZDHHC1Q8WTX9 485 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 KAT2AQ92830 837 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 RHNO1Q9BSD3 238 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CDCA4Q9BXL8 241 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 TCEAL2Q9H3H9 227 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SEMA6CQ9H3T2 930 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 MTHFD2LQ9H903 347 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 IL21RQ9HBE5 538 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ANKHQ9HCJ1 492 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 EQTNQ9NQ60 294 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 EVA1BQ9NVM1 165 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 POMT2Q9UKY4 750 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SATB2Q9UPW6 733 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CEP295Q9C0D2 2601 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 LOC105369274A0A096LPK9 316 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 LOC102723532A0A0G2JNH3 316 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 A0A1W2PS29 197 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 M0R3G1 203 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 AP3D1O14617 1153 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 PLOD3O60568 738 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 GPR75O95800 540 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 THBS1P07996 1170 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ADRB1P08588 477 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 INHBBP09529 407 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 POU1F1P28069 291 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ALDH4A1P30038 563 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 STT3AP46977 705 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 LSSP48449 732 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ENTPD1P49961 510 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 RAB15P59190 212 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 TAS2R41P59536 307 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SIM1P81133 766 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OCA2Q04671 838 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CHRNEQ04844 493 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 BNIP3Q12983 259 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms