RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 BORAQ6PGQ7 559 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 LCTLQ6UWM7 567 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 Q6ZSR6 202 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PRSS48Q7RTY5 328 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF227Q86WZ6 799 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PDLIM5Q96HC4 596 aaKnown RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF285Q96NJ3 590 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 TMEM168Q9H0V1 697 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ZBP1Q9H171 429 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PROS1P07225 676 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 CELP19835 753 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ENDOUP21128 410 aaKnown RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PRKCDQ05655 676 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 LKAAEAR1Q8TD35 194 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ASB11Q8WXH4 323 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 TM9SF2Q99805 663 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 SMCHD1A6NHR9 2005 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PROM1O43490 865 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 SDC3O75056 442 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 PTTG1O95997 202 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 CBLP22681 906 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 VAMP1P23763 118 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 P2RY2P41231 377 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 E2F1Q01094 437 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 ARHGAP19Q14CB8 494 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 TRAM1Q15629 374 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 TCTE1Q5JU00 501 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 LNX2Q8N448 690 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 SLC44A3Q8N4M1 653 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 OR2T33Q8NG76 320 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 OR56A3Q8NH54 315 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF471Q9BX82 626 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 STRADBQ9C0K7 418 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 TUBB1Q9H4B7 451 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 OLAHQ9NV23 265 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 PAQR5Q9NXK6 330 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 GPR89AB7ZAQ6 455 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 GPR89BP0CG08 455 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 EN2P19622 333 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 HSD11B1P28845 292 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 SPHARQ15513 63 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 FIGNL1Q6PIW4 674 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 OR51G2Q8NGK0 314 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 OR8J1Q8NGP2 316 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 FANK1Q8TC84 345 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 PEX11GQ96HA9 241 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 CLMPQ9H6B4 373 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 FOLH1BQ9HBA9 442 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 F5P12259 2224 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 CLCA1A8K7I4 914 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 DISC1C4P0D8 188 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 TP53I11O14683 189 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 FLRT2O43155 660 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 TACR1P25103 407 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 PLCXD2Q0VAA5 305 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 SCGB2B2Q4G0G5 96 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF767PQ75MW2 155 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 CIDECQ96AQ7 238 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 TEX37Q96LM6 180 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 KATNBL1Q9H079 304 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF700Q9H0M5 742 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 SMURF1Q9HCE7 757 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 SLC39A1Q9NY26 324 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 CCL26Q9Y258 94 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 A8MV72 311 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 DNASE1P24855 282 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 HTR2AP28223 471 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 ARF3P61204 181 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 ARF1P84077 181 aaKnown RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 BAIAP2L2Q6UXY1 529 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 NDNFQ8TB73 568 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 CMKLR1Q99788 373 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 POLDIP3Q9BY77 421 aaKnown RBP14.24□□□□□ -0.13
NPHP4-201ENST00000378156 TAS2R3Q9NYW6 316 aa14.24□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF701M0R085 212 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-201ENST00000378156 OR7A17O14581 309 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 CNR2P34972 360 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 POLR2IP36954 125 aaKnown RBP14.23□□□□□ -0.13
NPHP4-201ENST00000378156 SOX9P48436 509 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 PLEKHG7Q6ZR37 379 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 CHDHQ8NE62 594 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-201ENST00000378156 OR2L8Q8NGY9 312 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 DMRT3Q9NQL9 472 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 EXTL2Q9UBQ6 330 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 RNF144AP50876 292 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-201ENST00000378156 OCLNQ16625 522 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 DEFB110Q30KQ9 67 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 PDSS1Q5T2R2 415 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 LHFPL3Q86UP9 236 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 TIGD4Q8IY51 512 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 SPPL3Q8TCT6 385 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 THAP3Q8WTV1 239 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF480Q8WV37 535 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 MAFIPQ8WZ33 124 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 HSPA12BQ96MM6 686 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 RNF121Q9H920 327 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 CD300AQ9UGN4 299 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 INTS6Q9UL03 887 aaKnown RBP14.23□□□□□ -0.13
NPHP4-201ENST00000378156 PCDHGB5Q9Y5G0 923 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 LAMB2P55268 1798 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms