RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 HCKP08631 526 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 BPIP17213 487 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 SPINT3P49223 89 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 S100A12P80511 92 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 VWA2Q5GFL6 755 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 OR8K5Q8NH50 307 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 BMFQ96LC9 184 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 CPNE7Q9UBL6 633 aa10.27□□□□□ -0.77
HIF3A-205ENST00000377670 MRPS2Q9Y399 296 aaKnown RBP10.27□□□□□ -0.77
HIF3A-205ENST00000377670 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 TOXO94900 526 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 RGS19P49795 217 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 VAMP2P63027 116 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 TECRLQ5HYJ1 363 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 RANBP10Q6VN20 620 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 LRRC25Q8N386 305 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 DTX3Q8N9I9 347 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 SLC7A6OSQ96CW6 309 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 DDIT4LQ96D03 193 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 TRMT2BQ96GJ1 504 aaKnown RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 ALPK1Q96QP1 1244 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 TXLNGYQ9BZA5 131 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 DLGAP4Q9Y2H0 992 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 RPH3AQ9Y2J0 694 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 FUOMA2VDF0 154 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 SOCS2O14508 198 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 KCNAB2Q13303 367 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 HMGN2P46Q86SG4 172 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 SLC7A5P1Q8MH63 180 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 OR4K1Q8NGD4 311 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 THEM6Q8WUY1 208 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 EXTL2Q9UBQ6 330 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 CA5BQ9Y2D0 317 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 PLEKHA6Q9Y2H5 1048 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 FEZF1A0PJY2 475 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 ATE1O95260 518 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 VNN2O95498 520 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 ZNF14P17017 642 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 RNF144AP50876 292 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 SGSHP51688 502 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 ST3GAL4Q11206 333 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 ARFRP1Q13795 201 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 CDKL4Q5MAI5 379 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 TRAPPC6BQ86SZ2 158 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 OR8S1Q8NH09 359 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 MAELQ96JY0 434 aaKnown RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 RANBP3Q9H6Z4 567 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 SLC7A11Q9UPY5 501 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 PLSCR5A0PG75 271 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 C1orf226A1L170 272 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 H3BML4 177 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 MANBAO00462 879 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 PRRG2O14669 202 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 DENRO43583 198 aaKnown RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 CKMT1AP12532 417 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 GSTM3P21266 225 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 AK4P27144 223 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 SNRPD2P62316 118 aaKnown RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 PIGGQ5H8A4 983 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 C6orf141Q5SZD1 244 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 PLEKHG7Q6ZR37 379 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 KRTCAP2Q8N6L1 136 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 CXXC1Q9P0U4 656 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-205ENST00000377670 HSFX1Q9UBD0 423 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 R4GN57 208 aa10.26□□□□□ -0.77
HIF3A-205ENST00000377670 GOLGB1Q14789 3259 aaKnown RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 ARPC4-TTLL3A0A0A6YYG9 625 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 HTR3EA5X5Y0 456 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 GGT3PA6NGU5 568 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 SOX30O94993 753 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 APOC3P02656 99 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 CDH11P55287 796 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 SLC25A25Q6KCM7 469 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 SPATC1Q76KD6 591 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 PIANPQ8IYJ0 282 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 PPIL3Q9H2H8 161 aaKnown RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 TP63Q9H3D4 680 aaPredicted RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 CD93Q9NPY3 652 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 PCDHGB2Q9Y5G2 931 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 NPIPB15A6NHN6 443 aaPredicted RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 DISC1C4P0D8 188 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 APLNRP35414 380 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 NR0B1P51843 470 aaKnown RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 C10orf62Q5T681 223 aaPredicted RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 GAREM2Q75VX8 874 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 ZNF367Q7RTV3 350 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 ZNF101Q8IZC7 436 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 NXPE2Q96DL1 559 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 SLC6A18Q96N87 628 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 TSNAXQ99598 290 aaKnown RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 TM9SF2Q99805 663 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
HIF3A-205ENST00000377670 CD244Q9BZW8 370 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 KIAA1551Q9HCM1 1747 aa10.25□□□□□ -0.77
HIF3A-205ENST00000377670 TMEM221A6NGB7 291 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms