RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 C14orf28Q4W4Y0 310 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 TEX26Q8N6G2 289 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 CCDC32Q9BV29 185 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 SLC2A6Q9UGQ3 507 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 SLC1A7O00341 560 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ADAP00813 363 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 RBMS1P29558 406 aaKnown RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 KCNQ1P51787 676 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 NNATQ16517 81 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 SKA3Q8IX90 412 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 TP63Q9H3D4 680 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 POPDC3Q9HBV1 291 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ARFGEF3Q5TH69 2177 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 PIP5K1CO60331 668 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 LCKP06239 509 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 TFPTP0C1Z6 253 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 VEGFCP49767 419 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 RPS26P62854 115 aaKnown RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 MEF2AQ02078 507 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ELP2Q6IA86 826 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 TSPAN10Q9H1Z9 355 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF334Q9HCZ1 680 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 OR5K4A6NMS3 321 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 KLF11O14901 512 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 APLNRP35414 380 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ETV3P41162 512 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 CAV2P51636 162 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 DCAF4L2Q8NA75 395 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 OR4D6Q8NGJ1 314 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 OR51T1Q8NGJ9 327 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ADAMTS18Q8TE60 1221 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 MSI2Q96DH6 328 aaKnown RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 IL21RQ9HBE5 538 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 APMAPQ9HDC9 416 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 CNOT1A5YKK6 2376 aaKnown RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 KIAA0513O60268 411 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 LEFTY1O75610 366 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 BEST1O76090 585 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 KLF8O95600 359 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 FBRSL1Q9HCM7 1045 aaKnown RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF705GA8MUZ8 300 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ATE1O95260 518 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 SNHG28P0DPA3 235 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 IL1R2P27930 398 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 DEFB134Q4QY38 66 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 TMPRSS7Q7RTY8 843 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 KLBQ86Z14 1044 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF695Q8IW36 515 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 TMEM151AQ8N4L1 468 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 RAB7BQ96AH8 199 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 SGTBQ96EQ0 304 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 METTL2AQ96IZ6 378 aaKnown RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 GKN1Q9NS71 199 aa11.89□□□□□ -0.51
VPS13A-204ENST00000376634 NKX1-2Q9UD57 310 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-204ENST00000376634 TCRBV7S3A2A0A539 114 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 RHOP08100 348 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 TAS2R31P59538 309 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 FAM205BPQ63HN1 556 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 MAMDC2Q7Z304 686 aaPredicted RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 TXNDC15Q96J42 360 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 UBXN10Q96LJ8 280 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SLC6A16Q9GZN6 736 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 MAGIXQ9H6Y5 334 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 NENFQ9UMX5 172 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 AK1P00568 194 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 CATSPEREQ5SY80 951 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 FAM69BQ5VUD6 431 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 RELL1Q8IUW5 271 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 EGFL6Q8IUX8 553 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 OR52P1PQ8NH57 321 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 OR1S1Q8NH92 325 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 PLIN4Q96Q06 1357 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 TGM5O43548 720 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SC5DO75845 299 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 ELAVL3Q14576 367 aaKnown RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 BEST4Q8NFU0 473 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 HAS2Q92819 552 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 TBC1D20Q96BZ9 403 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SDSLQ96GA7 329 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 ST14Q9Y5Y6 855 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 GSRP00390 522 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 GALNT2Q10471 571 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 NANOGP8Q6NSW7 305 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 LRR1Q96L50 414 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 TRIB3Q96RU7 358 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 NANOGQ9H9S0 305 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 PLEKHM1Q9Y4G2 1056 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 INSL5Q9Y5Q6 135 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 IRS2Q9Y4H2 1338 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 VNN1O95497 513 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF169Q14929 603 aaPredicted RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 OR52E8Q6IFG1 317 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 PRR18Q8N4B5 295 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SNX18Q96RF0 628 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 HOXD1Q9GZZ0 328 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 PPIL3Q9H2H8 161 aaKnown RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 POT1Q9NUX5 634 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms