RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GALNT15Q8N3T1 639 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SIMC1Q8NDZ2 872 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 OR6C4Q8NGE1 309 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SLC9A6Q92581 669 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FKBP10Q96AY3 582 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 TGM7Q96PF1 710 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MTHFD2LQ9H903 347 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FANCEQ9HB96 536 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PDE7BQ9NP56 450 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CCNB1IP1Q9NPC3 277 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FTSJ1Q9UET6 329 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 RNF6Q9Y252 685 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MRPS33Q9Y291 106 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SNX5Q9Y5X3 404 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 NUP210LQ5VU65 1888 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 A0A0A6YYC8 382 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 IGHV5-51A0A0C4DH38 117 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 I3L1I5 382 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 NUDT21O43809 227 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SEC14L2O76054 403 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 AK1P00568 194 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ALOX5P09917 674 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ITIH1P19827 911 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SLC5A2P31639 672 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 KRT20P35900 424 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 LSAMPQ13449 338 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PIN1Q13526 163 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GTF2IRD2BQ6EKJ0 949 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 TYW3Q6IPR3 259 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 Q6ZPB1 254 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GTF2IRD2Q86UP8 949 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 VRK2Q86Y07 508 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CLVS1Q8IUQ0 354 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF595Q8IYB9 648 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SLC7A13Q8TCU3 470 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 IPCEF1Q8WWN9 437 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GTPBP3Q969Y2 492 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 DOK1Q99704 481 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FNDC11Q9BVV2 318 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF350Q9GZX5 532 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 QRSL1Q9H0R6 528 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MAN2C1Q9NTJ4 1040 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PLCXD1Q9NUJ7 323 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CHST2Q9Y4C5 530 aa16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ARID1BQ8NFD5 2236 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-201ENST00000374943 HYKKA2RU49 373 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZAR1LA6NP61 321 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FCMRO60667 390 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 NME6O75414 186 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SOX30O94993 753 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZBTB11O95625 1053 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 THBS1P07996 1170 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PCMT1P22061 227 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 RPS4Y1P22090 263 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CTSKP43235 329 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FNTBP49356 437 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 UGT2B15P54855 530 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MAP4K2Q12851 820 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 NR1D2Q14995 579 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PGBD2Q6P3X8 592 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 OR52P1PQ8NH57 321 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 RHOXF1Q8NHV9 184 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FAM81AQ8TBF8 368 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZFAND2BQ8WV99 257 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PMM1Q92871 262 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ISOC1Q96CN7 298 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SDF2Q99470 211 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 UCK2Q9BZX2 261 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SAP130Q9H0E3 1048 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ADAP2Q9NPF8 381 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SOHLH2Q9NX45 425 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 KLHL28Q9NXS3 571 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 TMEM9Q9P0T7 183 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 LRIT1Q9P2V4 623 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 REV1Q9UBZ9 1251 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SLC13A4Q9UKG4 626 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF443Q9Y2A4 671 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 WDR45Q9Y484 360 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PI4KAP42356 2102 aa16.8■□□□□ 0.28
HLA-DQB1-201ENST00000374943 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 HRO43593 1189 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 OR10H3O60404 316 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CTNSO60931 367 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 COQ9O75208 318 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CT62P0C5K7 136 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 OSMP13725 252 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GABRB1P18505 474 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PEX19P40855 299 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GPR3P46089 330 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CRISP1P54107 249 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 DUSP8Q13202 625 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 AP1ARQ63HQ0 302 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CD300LDQ6UXZ3 194 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 HMGN2P46Q86SG4 172 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PEX5LQ8IYB4 626 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MUL1Q969V5 352 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZG16BQ96DA0 208 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SIGLEC11Q96RL6 698 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ANKRD19PQ9H560 264 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CACYBPQ9HB71 228 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms