RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 EQTNQ9NQ60 294 aa11.04□□□□□ -0.64
HDAC8-201ENST00000373554 INTS9Q9NV88 658 aaKnown RBP11.04□□□□□ -0.64
HDAC8-201ENST00000373554 TRGV8A0A0C4DH27 118 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 GOLGA8QA0A0J9YX86 632 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 A0A1B0GUH1 482 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 GOLGA8OA6NCC3 632 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 TTC36A6NLP5 189 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 GOLGA8NF8WBI6 632 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SDHDO14521 159 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 UGT2B11O75310 529 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 REM1O75628 298 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SASH3O75995 380 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 WISP2O76076 250 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SNX4O95219 450 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 EFNA1P20827 205 aaPredicted RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 MAGEA5P43359 124 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 CLNS1AP54105 237 aaKnown RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 PRKAG1P54619 331 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 MRPS22P82650 360 aaKnown RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 HSF1Q00613 529 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 PSG6Q00889 435 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 FOXO1Q12778 655 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 EFR3AQ14156 821 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 HYAL4Q2M3T9 481 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 LSM12Q3MHD2 195 aaKnown RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 C1QL3Q5VWW1 255 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 TMEM198Q66K66 360 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 ARHGAP11AQ6P4F7 1023 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 TMEM81Q6P7N7 255 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 NPSR1Q6W5P4 371 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 LARP4Q71RC2 724 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SPATA19Q7Z5L4 167 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 CAMKMTQ7Z624 323 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 PACS2Q86VP3 889 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 WDR75Q8IWA0 830 aaKnown RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 TMEM251Q8N6I4 163 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 NUP43Q8NFH3 380 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 OR52N2Q8NGI0 321 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SSC4DQ8WTU2 575 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 OR5P2Q8WZ92 322 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 COQ8BQ96D53 544 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 TMCO6Q96DC7 493 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SLC35A4Q96G79 324 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 C7orf26Q96N11 449 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 RILPQ96NA2 401 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 COL21A1Q96P44 957 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 ADOQ96SZ5 270 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 OSBPL11Q9BXB4 747 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 ANGPTL4Q9BY76 406 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 WDR55Q9H6Y2 383 aaPredicted RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 ZNF703Q9H7S9 590 aaPredicted RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 ZDHHC11Q9H8X9 412 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 KLRF1Q9NZS2 232 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SH3BGRL2Q9UJC5 107 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 ERRFI1Q9UJM3 462 aaPredicted RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 MRTO4Q9UKD2 239 aaKnown RBP11.03□□□□□ -0.64
HDAC8-201ENST00000373554 SNX8Q9Y5X2 465 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 RELNP78509 3460 aa11.03□□□□□ -0.64
HDAC8-201ENST00000373554 LRRK2Q5S007 2527 aa11.02□□□□□ -0.64
HDAC8-201ENST00000373554 PRAMEF25A6NGN4 478 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 LRRC3CA6NJW4 275 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 PRRG2O14669 202 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 CFLARO15519 480 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 LRRTM2O43300 516 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 EMC8O43402 210 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 TSPAN2O60636 221 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 EPHA3P29320 983 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 CASP3P42574 277 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 CA7P43166 264 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 KIR3DL1P43629 444 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 PNLIPRP2P54317 469 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 PSMD4P55036 377 aaKnown RBP11.02□□□□□ -0.65
HDAC8-201ENST00000373554 SNTA1Q13424 505 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 DECR1Q16698 335 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 DPY19L1Q2PZI1 675 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 PGS1Q32NB8 556 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 SPDYE7PQ495Y7 208 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 CYP27C1Q4G0S4 372 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 BICRALQ6AI39 1079 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 NXNQ6DKJ4 435 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 WDR53Q7Z5U6 358 aaPredicted RBP11.02□□□□□ -0.65
HDAC8-201ENST00000373554 SPPL2CQ8IUH8 684 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 CDRT4Q8N9R6 151 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 HGDQ93099 445 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 EFHD2Q96C19 240 aaPredicted RBP11.02□□□□□ -0.65
HDAC8-201ENST00000373554 FAM120BQ96EK7 910 aaKnown RBP11.02□□□□□ -0.65
HDAC8-201ENST00000373554 NODALQ96S42 347 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 LMF2Q9BU23 707 aaKnown RBP11.02□□□□□ -0.65
HDAC8-201ENST00000373554 DEFB127Q9H1M4 99 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 PROK2Q9HC23 129 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 ZCCHC3Q9NUD5 404 aaKnown RBP11.02□□□□□ -0.65
HDAC8-201ENST00000373554 AIG1Q9NVV5 245 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 CBLCQ9ULV8 474 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 SVILO95425 2214 aa11.02□□□□□ -0.65
HDAC8-201ENST00000373554 ANKRD17O75179 2603 aaKnown RBP11.02□□□□□ -0.65
HDAC8-201ENST00000373554 EXPH5Q8NEV8 1989 aa11.01□□□□□ -0.65
HDAC8-201ENST00000373554 HECTD1Q9ULT8 2610 aa11.01□□□□□ -0.65
HDAC8-201ENST00000373554 A0A1B0GTH9 108 aa11.01□□□□□ -0.65
HDAC8-201ENST00000373554 E9PBE3 544 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms