RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 RPL13AP40429 203 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 P2RY2P41231 377 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CDKN2DP55273 166 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CEACAM7Q14002 265 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 GPR176Q14439 515 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 VAMP3Q15836 100 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 C6orf136Q5SQH8 315 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 WDR74Q6RFH5 385 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 ANKRD33Q7Z3H0 272 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 RNF130Q86XS8 419 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR5T2Q8NGG2 359 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CCDC32Q9BV29 185 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CPEB1Q9BZB8 566 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TMEM184CQ9NVA4 438 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZFR2Q9UPR6 939 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 COL18A1P39060 1754 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TJP1Q07157 1748 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MYH7P12883 1935 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TGOLN2O43493 480 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 SCAF4O95104 1147 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CH25HO95992 272 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 ANXA3P12429 323 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MYOGP15173 224 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 RPL23AP62750 156 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 UGT8Q16880 541 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TTLL10Q6ZVT0 673 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MFSD6LQ8IWD5 586 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MRPL41Q8IXM3 137 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CCDC116Q8IYX3 515 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR2L2Q8NH16 312 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 ADAMTS18Q8TE60 1221 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 HSPA12BQ96MM6 686 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 NPLQ9BXD5 320 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 NME7Q9Y5B8 376 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 C2orf92A0A1B0GVN3 265 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 LATO43561 262 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SYNGR4O95473 234 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 FDXRP22570 491 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 CASP6P55212 293 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 KCNC4Q03721 635 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 MGAT3Q09327 533 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SHHQ15465 462 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 TECRLQ5HYJ1 363 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 RAB41Q5JT25 222 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 REEP3Q6NUK4 255 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 FIGLAQ6QHK4 219 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 RNF111Q6ZNA4 994 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 DCP2Q8IU60 420 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 PSD4Q8NDX1 1056 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 MAGIXQ9H6Y5 334 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 NPIPB15A6NHN6 443 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SOCS2O14508 198 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 TNFRSF10BO14763 440 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 FANCGO15287 622 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 FLRT2O43155 660 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 RPP14O95059 124 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 CER1O95813 267 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 GGT5P36269 586 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 PIGFQ07326 219 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 GRM7Q14831 915 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 TMEM35AQ53FP2 167 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 TCTE1Q5JU00 501 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 AKR7LQ8NHP1 331 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 ACOT11Q8WXI4 607 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 TM9SF2Q99805 663 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 NIT2Q9NQR4 276 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 FAM118AQ9NWS6 357 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SULT1C2O00338 296 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 TMEM11P17152 192 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 DIO3P55073 304 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 S100A10P60903 97 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 DEFB133Q30KQ1 61 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 LYRM7Q5U5X0 104 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 NOXRED1Q6NXP6 359 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 HSDL2Q6YN16 418 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 PLEKHG7Q6ZR37 379 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 UEVLDQ8IX04 471 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 FCAMRQ8WWV6 532 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 C14orf119Q9NWQ9 140 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 B4GALT7Q9UBV7 327 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 WDR45Q9Y484 360 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 C1orf226A1L170 272 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 A6NHS1 94 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 WASH4PA8MWX3 477 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 E2F1Q01094 437 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 DSC1Q08554 894 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 AIMP2Q13155 320 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 NPRL2Q8WTW4 380 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 BCL7BQ9BQE9 202 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SOX17Q9H6I2 414 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SIT1Q9Y3P8 196 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SMAD6O43541 496 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 GJA4P35212 333 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 GLO1Q04760 184 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 CD47Q08722 323 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 FLYWCH1Q4VC44 716 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms