RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 MSANTD1Q6ZTZ1 278 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 UBQLNLQ8IYU4 475 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 NFKBIDQ8NI38 313 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 GPBAR1Q8TDU6 330 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 TM4SF18Q96CE8 201 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 PHOX2BQ99453 314 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 PELI2Q9HAT8 420 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 ISPDA4D126 451 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 TNFRSF10CO14798 259 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 PTTG1O95997 202 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 CD27P26842 260 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 HSD17B2P37059 387 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 MANFP55145 182 aaKnown RBP10.02□□□□□ -0.81
TPM3-212ENST00000368533 HYAL2Q12891 473 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 KEAP1Q14145 624 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 GANABQ14697 944 aaKnown RBP10.02□□□□□ -0.81
TPM3-212ENST00000368533 ZNF181Q2M3W8 571 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 NDUFAF5Q5TEU4 345 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 OR4C11Q6IEV9 310 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 FAM71E1Q6IPT2 247 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 FBXO42Q6P3S6 717 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 VN1R4Q7Z5H5 301 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 RNF130Q86XS8 419 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 SPEM1Q8N4L4 309 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 SLC5A8Q8N695 610 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 ANGPTL6Q8NI99 470 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 ASB12Q8WXK4 309 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 RAB8BQ92930 207 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 GTPBP3Q969Y2 492 aaKnown RBP10.02□□□□□ -0.81
TPM3-212ENST00000368533 RGMAQ96B86 450 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 DOHHQ9BU89 302 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 PCBD2Q9H0N5 130 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 DUSP21Q9H596 190 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 ZNF556Q9HAH1 456 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 FAM60AQ9NP50 221 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 ACOT13Q9NPJ3 140 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 NECTIN3Q9NQS3 549 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 OR6C2Q9NZP2 312 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 RHCGQ9UBD6 479 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 HEBP2Q9Y5Z4 205 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 A0A1W2PRB8 838 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 ATP6V1G2-DDX39BF2Z307 99 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 TSPAN4O14817 238 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 APOA1P02647 267 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 ICAM2P13598 275 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 HOXB9P17482 250 aaPredicted RBP10.02□□□□□ -0.81
TPM3-212ENST00000368533 SLC9A3P48764 834 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 ITGA1P56199 1179 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 VSX2P58304 361 aaPredicted RBP10.02□□□□□ -0.81
TPM3-212ENST00000368533 YIF1BQ5BJH7 314 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 FIGLAQ6QHK4 219 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 USP53Q70EK8 1073 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 NUDT13Q86X67 352 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 AVL9Q8NBF6 648 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 SIMC1Q8NDZ2 872 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 OR10G2Q8NGC3 310 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 OR5T3Q8NGG3 340 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 UBASH3BQ8TF42 649 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 MS4A6EQ96DS6 147 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 YIPF6Q96EC8 236 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 Q96MT0 163 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 UCK2Q9BZX2 261 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 CHRDQ9H2X0 955 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 CAPN10Q9HC96 672 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 CCNB1IP1Q9NPC3 277 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 EQTNQ9NQ60 294 aa10.02□□□□□ -0.81
TPM3-212ENST00000368533 NDRG4Q9ULP0 352 aaKnown RBP10.02□□□□□ -0.81
TPM3-212ENST00000368533 OR6C70A6NIJ9 312 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CTDSP2O14595 271 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CAPN5O15484 640 aaPredicted RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 CDC123O75794 336 aaPredicted RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 TP53P04637 393 aaPredicted RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 ST6GAL1P15907 406 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 GFERP55789 205 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 DUSP2Q05923 314 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 SCARB2Q14108 478 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 DUSP7Q16829 419 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 SLC5A12Q1EHB4 618 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 PAMR1Q6UXH9 720 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 TAGAPQ8N103 731 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 SYNPOQ8N3V7 929 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 STX19Q8N4C7 294 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 ACOT4Q8N9L9 421 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 MSANTD3Q96H12 275 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 FCRL1Q96LA6 429 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 KCNS3Q9BQ31 491 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 RAB11FIP5Q9BXF6 653 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 RLIMQ9NVW2 624 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 OSGIN1Q9UJX0 560 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CORO2BQ9UQ03 480 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 PCDHGB6Q9Y5F9 930 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CSF2P04141 144 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 NAGAP17050 411 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 PPIBP23284 216 aaKnown RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 GPC1P35052 558 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 KCNJ10P78508 379 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 SIM1P81133 766 aaPredicted RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms