RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ACAD8Q9UKU7 415 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 SMCO3A2RU48 225 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 PPM1BO75688 479 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 C1SP09871 688 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 PVALBP20472 110 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 MAGEA2P43356 314 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 MFSD6LQ8IWD5 586 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 OR52R1Q8NGF1 315 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 PELOQ9BRX2 385 aaKnown RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 RNF215Q9Y6U7 377 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 ADAMTS4O75173 837 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 OR1D4P47884 311 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 C10orf62Q5T681 223 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-207ENST00000368226 PRAMEF8Q5VWM4 474 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 PRAMEF7Q5VXH5 474 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 UEVLDQ8IX04 471 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 SYNPOQ8N3V7 929 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 SLC5A8Q8N695 610 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 SLC22A12Q96S37 553 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 NELL2Q99435 816 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 PISDQ9UG56 409 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 LRRN3E7EW58 273 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF43P17038 809 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 RBM34P42696 430 aaKnown RBP12.21□□□□□ -0.45
PTPRK-207ENST00000368226 CSNK1EP49674 416 aaKnown RBP12.21□□□□□ -0.45
PTPRK-207ENST00000368226 GALNT1Q10472 559 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-207ENST00000368226 METTL2BQ6P1Q9 378 aaKnown RBP12.21□□□□□ -0.45
PTPRK-207ENST00000368226 FBXO27Q8NI29 283 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 ADAMTS19Q8TE59 1207 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 ISOC1Q96CN7 298 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 NEDD4LQ96PU5 975 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 LMF1Q96S06 567 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 LRRN3Q9H3W5 708 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 GSTO2Q9H4Y5 243 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF442Q9H7R0 627 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 FAM118AQ9NWS6 357 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 DRGXA6NNA5 263 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF850A8MQ14 1090 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 NME4O00746 187 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 LSM1O15116 133 aaKnown RBP12.21□□□□□ -0.45
PTPRK-207ENST00000368226 FESP07332 822 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 DPP6P42658 865 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 CDKN2CP42773 168 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 SUOXP51687 545 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 TLE3Q04726 772 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 MALLQ13021 153 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 CTSL3PQ5NE16 218 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 UBE2UQ5VVX9 321 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF367Q7RTV3 350 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 TRAPPC6BQ86SZ2 158 aa12.21□□□□□ -0.45
PTPRK-207ENST00000368226 FAM189A1O60320 539 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 STOMP27105 288 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 FNTBP49356 437 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 EMP2P54851 167 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 BCL2L15Q5TBC7 163 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 TMEM173Q86WV6 379 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-207ENST00000368226 AIFM2Q9BRQ8 373 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 CHD4Q14839 1912 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 KIAA0355O15063 1070 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 SLC2A5P22732 501 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 ZNF140P52738 457 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-207ENST00000368226 OR7A5Q15622 319 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 ZNF584Q8IVC4 421 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 MCATQ8IVS2 390 aaKnown RBP12.21□□□□□ -0.46
PTPRK-207ENST00000368226 SFXN2Q96NB2 322 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 CPNE7Q9UBL6 633 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 SCML1Q9UN30 329 aa12.21□□□□□ -0.46
PTPRK-207ENST00000368226 KRBA1A5PL33 1030 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 PHC1P78364 1004 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 C6orf141Q5SZD1 244 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 ACOT4Q8N9L9 421 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 OR4K5Q8NGD3 323 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 OR10A4Q9H209 315 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 FMO6PO60774 539 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 FBXO45P0C2W1 286 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 MYH3P11055 1940 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 NOVP48745 357 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 ACY1Q03154 408 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 C3orf33Q6P1S2 294 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 TEX26Q8N6G2 289 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 IL17RCQ8NAC3 791 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 C2orf42Q9NWW7 574 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 TRBV11-1A0A0K0K1C0 115 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 M0R036 132 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 CD3GP09693 182 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 CNR2P34972 360 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 ZP2Q05996 745 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 PIP5KL1Q5T9C9 394 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 ARHGAP11AQ6P4F7 1023 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 MAMDC2Q7Z304 686 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-207ENST00000368226 MINDY1Q8N5J2 469 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 OR9A4Q8NGU2 314 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 OR5J2Q8NH18 312 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 ARRDC3Q96B67 414 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 ZNF285Q96NJ3 590 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 MS4A4EQ96PG1 132 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 FBRSQ9HAH7 460 aa12.2□□□□□ -0.46
PTPRK-207ENST00000368226 SEC14L4Q9UDX3 406 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms